RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 FOLR2P14207 255 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 CELP19835 753 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 ZBTB25P24278 435 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 PTBP1P26599 531 aaKnown RBP eCLIP3.07□□□□□ -1.92
VPS52-222ENST00000495981 BCAP31P51572 246 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 AP2S1P53680 142 aaPredicted RBP3.07□□□□□ -1.92
VPS52-222ENST00000495981 RAB4BP61018 213 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 UBE2KP61086 200 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 ST3GAL4Q11206 333 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 EIF4EBP1Q13541 118 aaPredicted RBP3.07□□□□□ -1.92
VPS52-222ENST00000495981 MRPL23Q16540 153 aaKnown RBP3.07□□□□□ -1.92
VPS52-222ENST00000495981 KLK9Q2XQG4 91 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 DEFB114Q30KQ6 69 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 C15orf32Q32M92 178 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 SAPCD1Q5SSQ6 148 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 UNQ9165/PRO28630Q6UXU0 137 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 OR4C5Q8NGB2 326 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 OR4A4PQ8NGN8 299 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 USMG5Q96IX5 58 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 GGTLC1Q9BX51 225 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 TUBA4BQ9H853 241 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 ZNF430Q9H8G1 570 aaPredicted RBP3.07□□□□□ -1.92
VPS52-222ENST00000495981 COA4Q9NYJ1 87 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 KLK9Q9UKQ9 250 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 TBC1D24Q9ULP9 559 aa3.07□□□□□ -1.92
VPS52-222ENST00000495981 MUC2Q02817 5179 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 A0A0J9YWU9 116 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 ZNF98A6NK75 572 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 OR11H12B2RN74 326 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 TRDCB7Z8K6 153 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 E7EUB6 86 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 RTL8CO15255 209 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 KBTBD11O94819 623 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 CDK1P06493 297 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 SNRPCP09234 159 aaKnown RBP3.06□□□□□ -1.92
VPS52-222ENST00000495981 CT45A10P0DMU9 189 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 HIST1H1DP16402 221 aaKnown RBP3.06□□□□□ -1.92
VPS52-222ENST00000495981 CD40LGP29965 261 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 FGF9P31371 208 aaPredicted RBP3.06□□□□□ -1.92
VPS52-222ENST00000495981 CEACAM6P40199 344 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 LEPP41159 167 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 KIR2DS2P43631 304 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 LGALS7P47929 136 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 SERPINB10P48595 397 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 CLDN12P56749 244 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 RPS25P62851 125 aaKnown RBP3.06□□□□□ -1.92
VPS52-222ENST00000495981 RPL30P62888 115 aaKnown RBP3.06□□□□□ -1.92
VPS52-222ENST00000495981 TNFRSF9Q07011 255 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 CDK10Q15131 360 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 TNXAQ16473 311 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 RTL8BQ17RB0 113 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 ACSM3Q53FZ2 586 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 HSD17B12Q53GQ0 312 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 UFSP1Q6NVU6 142 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 TMEM91Q6ZNR0 172 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 Q6ZS49 121 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 LYG2Q86SG7 212 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 H1FOOQ8IZA3 346 aaPredicted RBP3.06□□□□□ -1.92
VPS52-222ENST00000495981 NECAP1Q8NC96 275 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 ZNF555Q8NEP9 628 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 FAT3Q8TDW7 4589 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 DYNLRB2Q8TF09 96 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 MAFIPQ8WZ33 124 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 DGCR14Q96DF8 476 aaKnown RBP3.06□□□□□ -1.92
VPS52-222ENST00000495981 RNF2Q99496 336 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 MND1Q9BWT6 205 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 PECRQ9BY49 303 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 SCRT2Q9NQ03 307 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 ZNF355PQ9NSJ1 428 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 PLEKHJ1Q9NW61 149 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 TP53TG1Q9Y2A0 90 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 ZNF257Q9Y2Q1 563 aa3.06□□□□□ -1.92
VPS52-222ENST00000495981 IGLV11-55A0A075B6I3 123 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 IGKV1D-13A0A0B4J2D9 117 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 IGLC7A0M8Q6 106 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 KRTAP29-1A8MX34 341 aaPredicted RBP3.05□□□□□ -1.92
VPS52-222ENST00000495981 TEX46H3BTG2 121 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 OR2J3O76001 311 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 CNIH1O95406 144 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 TSPAN13O95857 204 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 IGHV3-23P01764 117 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 CRYGCP07315 174 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 IGKV1-13P0DP09 117 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 RAB4AP20338 218 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 CBLN1P23435 193 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 TALDO1P37837 337 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 OR10A3P58181 314 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 CD300CQ08708 224 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 MED21Q13503 144 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 RAB11BQ15907 218 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 GUCA2BQ16661 112 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 TRIM16LQ309B1 348 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 DEFB135Q30KP9 77 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 VMA21Q3ZAQ7 101 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 OR2B11Q5JQS5 317 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 GLT8D1Q68CQ7 371 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 LGALS9CQ6DKI2 356 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 CEMP1Q6PRD7 247 aaPredicted RBP3.05□□□□□ -1.92
VPS52-222ENST00000495981 NR2C2APQ86WQ0 139 aa3.05□□□□□ -1.92
VPS52-222ENST00000495981 PUSL1Q8N0Z8 303 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms