RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 ZNF343Q6P1L6 599 aa12.12□□□□□ -0.47
PHF1-211ENST00000495509 ZNF414Q96IQ9 312 aa12.12□□□□□ -0.47
PHF1-211ENST00000495509 PSMG3Q9BT73 122 aaPredicted RBP12.12□□□□□ -0.47
PHF1-211ENST00000495509 TIMM9Q9Y5J7 89 aa12.12□□□□□ -0.47
PHF1-211ENST00000495509 C17orf112F2Z3M2 114 aa12.11□□□□□ -0.47
PHF1-211ENST00000495509 PSG1P11464 419 aa12.11□□□□□ -0.47
PHF1-211ENST00000495509 FHITP49789 147 aa12.11□□□□□ -0.47
PHF1-211ENST00000495509 SULT1A2P50226 295 aa12.11□□□□□ -0.47
PHF1-211ENST00000495509 PRIMA1Q86XR5 153 aa12.11□□□□□ -0.47
PHF1-211ENST00000495509 COMMD1Q8N668 190 aa12.11□□□□□ -0.47
PHF1-211ENST00000495509 TRAV30A0A087WSZ9 112 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.1□□□□□ -0.47
PHF1-211ENST00000495509 RAB19A4D1S5 217 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 NUDT19A8MXV4 375 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 KRTAP10-3P60369 221 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 B2MP61769 119 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 SLC39A9Q9NUM3 307 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 TENM1Q9UKZ4 2725 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 NUPL2O15504 423 aaKnown RBP12.1□□□□□ -0.47
PHF1-211ENST00000495509 TGOLN2O43493 480 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 RD3LP0DJH9 198 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 RAB2AP61019 212 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 BLOC1S1P78537 153 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 SERF2P84101 59 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 ZNF616Q08AN1 781 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 UQCC3Q6UW78 93 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 UBE2E2Q96LR5 201 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 RPRMQ9NS64 109 aa12.1□□□□□ -0.47
PHF1-211ENST00000495509 EIF3GO75821 320 aaKnown RBP eCLIP12.09□□□□□ -0.47
PHF1-211ENST00000495509 TSPAN15O95858 294 aa12.09□□□□□ -0.47
PHF1-211ENST00000495509 ARL3P36405 182 aa12.09□□□□□ -0.47
PHF1-211ENST00000495509 YPEL3P61236 119 aaPredicted RBP12.09□□□□□ -0.47
PHF1-211ENST00000495509 PXDC1Q5TGL8 231 aa12.09□□□□□ -0.47
PHF1-211ENST00000495509 DOK5Q9P104 306 aa12.09□□□□□ -0.47
PHF1-211ENST00000495509 IGHV3OR16-8A0A075B7F1 116 aa12.08□□□□□ -0.48
PHF1-211ENST00000495509 BMPR1BO00238 502 aa12.08□□□□□ -0.48
PHF1-211ENST00000495509 OR2C1O95371 312 aa12.08□□□□□ -0.48
PHF1-211ENST00000495509 SELENOTP62341 195 aa12.08□□□□□ -0.48
PHF1-211ENST00000495509 KHDC1LQ5JSQ8 128 aa12.08□□□□□ -0.48
PHF1-211ENST00000495509 CITED2Q99967 270 aaPredicted RBP12.08□□□□□ -0.48
PHF1-211ENST00000495509 GAR1Q9NY12 217 aaKnown RBP12.08□□□□□ -0.48
PHF1-211ENST00000495509 PEF1Q9UBV8 284 aaKnown RBP12.08□□□□□ -0.48
PHF1-211ENST00000495509 TOMM40O96008 361 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 CDX1P47902 265 aaPredicted RBP12.07□□□□□ -0.48
PHF1-211ENST00000495509 AKR1C8PQ5T2L2 129 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 PATE2Q6UY27 113 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 IL34Q6ZMJ4 242 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 RPP25LQ8N5L8 163 aaKnown RBP12.07□□□□□ -0.48
PHF1-211ENST00000495509 TMEM37Q8WXS4 190 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 HRH4Q9H3N8 390 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 PUS1Q9Y606 427 aaKnown RBP eCLIP12.07□□□□□ -0.48
PHF1-211ENST00000495509 FBN1P35555 2871 aaKnown RBP12.07□□□□□ -0.48
PHF1-211ENST00000495509 SCO1O75880 301 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 ORM2P19652 201 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 TMEM41BQ5BJD5 291 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 SPSB3Q6PJ21 355 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 Q6ZRG5 221 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 OR51G1Q8NGK1 321 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 OR10G4Q8NGN3 311 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 OR10G9Q8NGN4 311 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 OR10G7Q8NGN6 311 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 Q8WTZ3 238 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 NARS2Q96I59 477 aaKnown RBP12.07□□□□□ -0.48
PHF1-211ENST00000495509 ATP6V0BQ99437 205 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 WNK1Q9H4A3 2382 aa12.07□□□□□ -0.48
PHF1-211ENST00000495509 A0A1W2PRX2 142 aa12.06□□□□□ -0.48
PHF1-211ENST00000495509 LGALS1P09382 135 aaKnown RBP12.06□□□□□ -0.48
PHF1-211ENST00000495509 M6PRP20645 277 aa12.06□□□□□ -0.48
PHF1-211ENST00000495509 LYZP61626 148 aa12.06□□□□□ -0.48
PHF1-211ENST00000495509 DEFB136Q30KP8 78 aa12.06□□□□□ -0.48
PHF1-211ENST00000495509 ACOT6Q3I5F7 207 aaPredicted RBP12.06□□□□□ -0.48
PHF1-211ENST00000495509 KRTAP24-1Q3LI83 254 aa12.06□□□□□ -0.48
PHF1-211ENST00000495509 SSX7Q7RTT5 188 aa12.06□□□□□ -0.48
PHF1-211ENST00000495509 OR1B1Q8NGR6 318 aa12.06□□□□□ -0.48
PHF1-211ENST00000495509 FAM213BQ8TBF2 198 aa12.06□□□□□ -0.48
PHF1-211ENST00000495509 RCC1LQ96I51 464 aaKnown RBP12.06□□□□□ -0.48
PHF1-211ENST00000495509 PBDC1Q9BVG4 233 aa12.06□□□□□ -0.48
PHF1-211ENST00000495509 KCNIP2Q9NS61 270 aa12.06□□□□□ -0.48
PHF1-211ENST00000495509 WI2-2373I1.2A0A1W2PRP0 233 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 UMAD1C9J7I0 102 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 IL4P05112 153 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 OR5G3P0C626 314 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 ZNF726P1Q15940 193 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 SPATA31B1PQ5VZV4 182 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 TOMM20LQ6UXN7 152 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 ZNF600Q6ZNG1 722 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 UHRF2Q96PU4 802 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 SEPSECSQ9HD40 501 aaKnown RBP12.05□□□□□ -0.48
PHF1-211ENST00000495509 DNAJC4Q9NNZ3 241 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 IGHV4OR15-8A0A075B7B6 117 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 A0A087WW49 117 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 HMGB3O15347 200 aaKnown RBP12.05□□□□□ -0.48
PHF1-211ENST00000495509 FABP1P07148 127 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 RAB5CP51148 216 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 FOXL1Q12952 345 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 USF2Q15853 346 aaPredicted RBP12.05□□□□□ -0.48
PHF1-211ENST00000495509 MORN5Q5VZ52 161 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 FAM122CQ6P4D5 195 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 KLHL30-AS1Q8NEE0 82 aa12.05□□□□□ -0.48
PHF1-211ENST00000495509 C4orf3Q8WVX3 66 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms