RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 HMGB3O15347 200 aaKnown RBP8.09□□□□□ -1.11
HDAC3-214ENST00000495485 OR7C2O60412 319 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 PAGE4O60829 102 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 YPEL3P61236 119 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-214ENST00000495485 RPL15P61313 204 aaKnown RBP8.09□□□□□ -1.11
HDAC3-214ENST00000495485 SSBP2P81877 361 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-214ENST00000495485 BTN1A1Q13410 526 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 GUCA2BQ16661 112 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 KLF17Q5JT82 389 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-214ENST00000495485 CST9LP1Q5W188 147 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 RUSC1-AS1Q66K80 236 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 BRD3OSQ6XYD6 125 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 C5orf56Q8N8D9 126 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 CYB561D1Q8N8Q1 229 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 OR51G1Q8NGK1 321 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 OR5R1Q8NH85 324 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 Q8WTZ3 238 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 ATP6V0BQ99437 205 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 SEPSECSQ9HD40 501 aaKnown RBP8.09□□□□□ -1.11
HDAC3-214ENST00000495485 RPS10P5Q9NQ39 176 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 SMCO4Q9NRQ5 59 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 PUS1Q9Y606 427 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC3-214ENST00000495485 CUBNO60494 3623 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 IGHV3OR16-10A0A075B7F0 116 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 ZNF727A8MUV8 499 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 C9JQL5 133 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 H3BQ15 152 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 H3BUX3 64 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 RD3LP0DJH9 198 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 IGHV4-38-2P0DP08 117 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 MFAP2P55001 183 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 HILS1P60008 231 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 KLK9Q2XQG4 91 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 Q56UQ5 140 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 GCSAMLQ5JQS6 135 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 RPUSD4Q96CM3 377 aaKnown RBP8.08□□□□□ -1.12
HDAC3-214ENST00000495485 FAM103A1Q9BTL3 118 aaKnown RBP8.08□□□□□ -1.12
HDAC3-214ENST00000495485 TMPRSS5Q9H3S3 457 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 ZNF355PQ9NSJ1 428 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 C21orf62Q9NYP8 219 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 NAT8Q9UHE5 227 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 KLK9Q9UKQ9 250 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 HIGD1AQ9Y241 93 aa8.08□□□□□ -1.12
HDAC3-214ENST00000495485 IGKV1D-37A0A075B6S9 117 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 TRBV7-1A0A0A6YYK4 115 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 A0A1W2PRE2 83 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 A6NDX4 124 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 H3BUA1 57 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 K7EIM0 57 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 SCO1O75880 301 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 TOMM40O96008 361 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 IGLC1P0CG04 106 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 ORM2P19652 201 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 PAX6P26367 422 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 FCGR2BP31994 310 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-214ENST00000495485 CRIP2P52943 208 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-214ENST00000495485 ZNF90Q03938 601 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 TMEM241Q24JQ0 296 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 FAM209BQ5JX69 171 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 MIR17HGQ75NE6 70 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 LINC00305Q7Z4B0 112 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 NECAP1Q8NC96 275 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 OR5T1Q8NG75 326 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 OR1B1Q8NGR6 318 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 SMIM7Q9BQ49 75 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 TCEAL7Q9BRU2 100 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 PAXXQ9BUH6 204 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 OR51M1Q9H341 326 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 FBXL7Q9UJT9 491 aa8.07□□□□□ -1.12
HDAC3-214ENST00000495485 A0A087WWC5 75 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 FAM223BA6NKX1 122 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 ATP6V0E1O15342 81 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 NUPL2O15504 423 aaKnown RBP8.06□□□□□ -1.12
HDAC3-214ENST00000495485 IGHV3-48P01763 117 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 GATA2P23769 480 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-214ENST00000495485 CD81P60033 236 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 UBE2G2P60604 165 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 ECSCRQ19T08 205 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 AWAT1Q58HT5 328 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 C9orf152Q5JTZ5 239 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 IL17RELQ6ZVW7 336 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 FAM223AQ8IWN6 122 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 OR5AU1Q8NGC0 362 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 TMEM37Q8WXS4 190 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 EEF1AKMT3Q96AZ1 226 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 TUBA4BQ9H853 241 aa8.06□□□□□ -1.12
HDAC3-214ENST00000495485 PLXNB1O43157 2135 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 IGHV3-21A0A0B4J1V1 117 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 TRAV41A0A0B4J266 112 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 C7orf77A4D0Y5 90 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 PSMB11A5LHX3 300 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 CXorf65A6NEN9 183 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 AP4M1O00189 453 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 BRI3O95415 125 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 MT-ND4LP03901 98 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 IGF1P05019 195 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 EGR2P11161 476 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-214ENST00000495485 PSG1P11464 419 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 RAB9AP51151 201 aa8.05□□□□□ -1.12
HDAC3-214ENST00000495485 LYZP61626 148 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms