RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 AMMECR1LQ6DCA0 310 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 LINC00305Q7Z4B0 112 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 OR1L4Q8NGR5 311 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 GPR82Q96P67 336 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 MRPL20Q9BYC9 149 aaKnown RBP12.34□□□□□ -0.43
SDF4-207ENST00000494748 PLSCR4Q9NRQ2 329 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 ZNF492Q9P255 531 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 LOC102724200A0A096LPH7 203 aaPredicted RBP12.34□□□□□ -0.43
SDF4-207ENST00000494748 C22orf46C9J442 243 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 PGLYRP4Q96LB8 373 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 NDFIP1Q9BT67 221 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 PLXNB1O43157 2135 aa12.34□□□□□ -0.43
SDF4-207ENST00000494748 NPIPB6E9PJ23 425 aa12.33□□□□□ -0.43
SDF4-207ENST00000494748 ZNF138P52744 262 aa12.33□□□□□ -0.43
SDF4-207ENST00000494748 C10orf55Q5SWW7 151 aa12.33□□□□□ -0.43
SDF4-207ENST00000494748 TIMM8BQ9Y5J9 83 aaPredicted RBP12.33□□□□□ -0.43
SDF4-207ENST00000494748 TRAV8-6A0A0B4J262 113 aa12.33□□□□□ -0.44
SDF4-207ENST00000494748 PSG9Q00887 426 aa12.33□□□□□ -0.44
SDF4-207ENST00000494748 MRGPRG-AS1Q2M3A8 158 aa12.33□□□□□ -0.44
SDF4-207ENST00000494748 FAM162BQ5T6X4 162 aa12.33□□□□□ -0.44
SDF4-207ENST00000494748 ETFRF1Q6IPR1 90 aa12.33□□□□□ -0.44
SDF4-207ENST00000494748 CACNA1HO95180 2353 aa12.33□□□□□ -0.44
SDF4-207ENST00000494748 GATA4P43694 442 aa12.33□□□□□ -0.44
SDF4-207ENST00000494748 C16orf54Q6UWD8 224 aa12.33□□□□□ -0.44
SDF4-207ENST00000494748 FAM216BQ8N7L0 139 aa12.33□□□□□ -0.44
SDF4-207ENST00000494748 OSR1Q8TAX0 266 aaPredicted RBP12.33□□□□□ -0.44
SDF4-207ENST00000494748 H1FXQ92522 213 aaKnown RBP12.33□□□□□ -0.44
SDF4-207ENST00000494748 FER1L6-AS2Q96M78 137 aa12.33□□□□□ -0.44
SDF4-207ENST00000494748 RAB9BQ9NP90 201 aa12.33□□□□□ -0.44
SDF4-207ENST00000494748 SOX21Q9Y651 276 aaPredicted RBP12.33□□□□□ -0.44
SDF4-207ENST00000494748 A0A087X0K7 114 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 ZNF785A8K8V0 405 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 SPRY3O43610 288 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 GFRA4Q9GZZ7 299 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 SLC25A5P05141 298 aaKnown RBP12.32□□□□□ -0.44
SDF4-207ENST00000494748 LPAL2Q16609 132 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 TMEM177Q53S58 311 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 LINC01545Q5VT33 79 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 FAM169BQ8N8A8 192 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 HARBI1Q96MB7 349 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 PGPA6NDG6 321 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 CD5LO43866 347 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 FCN3O75636 299 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 SP9P0CG40 484 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 GP9P14770 177 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 PET117Q6UWS5 81 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 PDPNQ86YL7 162 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 TMEM178AQ8NBL3 297 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 OR5AN1Q8NGI8 311 aa12.32□□□□□ -0.44
SDF4-207ENST00000494748 CBY3A6NI87 242 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 IGLV2-23P01705 113 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 BPIFB3P59826 476 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 C12orf54Q6X4T0 127 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 ZNF788Q6ZQV5 615 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 ZCCHC24Q8N2G6 241 aaKnown RBP12.31□□□□□ -0.44
SDF4-207ENST00000494748 BLNKQ8WV28 456 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 TMEM191AQ9H0A3 160 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 A8MWL6 223 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 ERHP84090 104 aaKnown RBP12.31□□□□□ -0.44
SDF4-207ENST00000494748 RBPMS2Q6ZRY4 209 aaKnown RBP12.31□□□□□ -0.44
SDF4-207ENST00000494748 TMEM167AQ8TBQ9 72 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 CCL13Q99616 98 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 WNK2Q9Y3S1 2297 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 ZNF137PP52743 207 aa12.31□□□□□ -0.44
SDF4-207ENST00000494748 IGLV3-9A0A075B6K5 115 aa12.3□□□□□ -0.44
SDF4-207ENST00000494748 LIPFP07098 398 aa12.3□□□□□ -0.44
SDF4-207ENST00000494748 BHLHA15Q7RTS1 189 aaPredicted RBP12.3□□□□□ -0.44
SDF4-207ENST00000494748 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
SDF4-207ENST00000494748 NEU4Q8WWR8 484 aaPredicted RBP12.3□□□□□ -0.44
SDF4-207ENST00000494748 ZC2HC1AQ96GY0 325 aa12.3□□□□□ -0.44
SDF4-207ENST00000494748 MS4A6AQ9H2W1 248 aa12.3□□□□□ -0.44
SDF4-207ENST00000494748 TM4SF5O14894 197 aa12.3□□□□□ -0.44
SDF4-207ENST00000494748 OR5AL1P0C617 328 aa12.3□□□□□ -0.44
SDF4-207ENST00000494748 HIST1H1AQ02539 215 aaPredicted RBP12.3□□□□□ -0.44
SDF4-207ENST00000494748 PVRIGQ6DKI7 326 aa12.3□□□□□ -0.44
SDF4-207ENST00000494748 FMC1Q96HJ9 113 aa12.3□□□□□ -0.44
SDF4-207ENST00000494748 TMUB1Q9BVT8 246 aa12.3□□□□□ -0.44
SDF4-207ENST00000494748 DCHS1Q96JQ0 3298 aa12.3□□□□□ -0.44
SDF4-207ENST00000494748 IGLV2-11P01706 119 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 CRYGCP07315 174 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 WT1P19544 449 aaPredicted RBP12.29□□□□□ -0.44
SDF4-207ENST00000494748 DIAPH2-AS1Q14236 149 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 MED13LQ71F56 2210 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 PKDREJQ9NTG1 2253 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 SPTBN1Q01082 2364 aaKnown RBP12.29□□□□□ -0.44
SDF4-207ENST00000494748 HAX1O00165 279 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 NCR2O95944 276 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 P01737 135 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 TCRAP04437 139 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 UBALD2Q8IYN6 164 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 PMCHL2Q9BQD1 86 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 PRR33A8MZF0 331 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 ZNF883P0CG24 379 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 FGF6P10767 208 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 SEM1Q6ZVN7 128 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 RPH3ALQ9UNE2 315 aa12.29□□□□□ -0.44
SDF4-207ENST00000494748 CACNA1BQ00975 2339 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 PCNX1Q96RV3 2341 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 NBEAP1P0C6P0 100 aa12.28□□□□□ -0.44
SDF4-207ENST00000494748 IGLC1P0CG04 106 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms