RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TRAV12-1A0A0B4J245 112 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 IGLV3-21P80748 117 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-221ENST00000493795 PRB3Q04118 309 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-221ENST00000493795 BMPERQ8N8U9 685 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 NUP35Q8NFH5 326 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 RMI2Q96E14 147 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 LY96Q9Y6Y9 160 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 FGF16O43320 207 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 CGB7P0DN87 165 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 TRGV9Q99603 122 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 C1orf43Q9BWL3 253 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 LIME1Q9H400 295 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 IGKV1D-13A0A0B4J2D9 117 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 A0A1W2PPI3 338 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 FCN3O75636 299 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 IGKV1-13P0DP09 117 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 C1orf53Q5VUE5 145 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 TREML4Q6UXN2 200 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 SLC25A45Q8N413 288 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 VSIRQ9H7M9 311 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 TSSC4Q9Y5U2 329 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-221ENST00000493795 TOGARAM1Q9Y4F4 1720 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 A0A1B0GW64 132 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 A0A1B0GWJ7 208 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 WFDC1Q9HC57 220 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 FBLN5Q9UBX5 448 aa6.48□□□□□ -1.37
BRCA1-221ENST00000493795 TRBV25-1A0A075B6N4 114 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 A0A087WWL8 130 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 F8W1H4 67 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 PFN2P35080 140 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 UBE2E2Q96LR5 201 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 RFPL3SP0C7P2 107 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 LCN12Q6JVE5 192 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 SIGLEC12Q96PQ1 595 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 KIF13AQ9H1H9 1805 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 C22orf46C9J442 243 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 DEFB130BP0DP73 79 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 DEFB130AP0DP74 79 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 RSPO4Q2I0M5 234 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-221ENST00000493795 MORN5Q5VZ52 161 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 SPATA31B1PQ5VZV4 182 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 LYPD1Q8N2G4 141 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 CTHRC1Q96CG8 243 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 NCOR1P1Q9H4R4 102 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 RPUSD1Q9UJJ7 312 aaKnown RBP6.47□□□□□ -1.37
BRCA1-221ENST00000493795 FAM231BA6NCW3 169 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 FAM223BA6NKX1 122 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 WISP3O95389 354 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-221ENST00000493795 CELA3AP09093 270 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 ID3Q02535 119 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 ZNF362Q5T0B9 420 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-221ENST00000493795 FAM223AQ8IWN6 122 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 ANKRD29Q8N6D5 301 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 ATP6V0BQ99437 205 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 LINC00527Q9UJ94 153 aa6.47□□□□□ -1.37
BRCA1-221ENST00000493795 CHCHD2Q9Y6H1 151 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-221ENST00000493795 TRAV13-2A0A0B4J235 113 aa6.46□□□□□ -1.37
BRCA1-221ENST00000493795 SMIM10L1P0DMW3 83 aa6.46□□□□□ -1.37
BRCA1-221ENST00000493795 PRB4P10163 310 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-221ENST00000493795 FOXG1P55316 489 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-221ENST00000493795 SLAQ13239 276 aa6.46□□□□□ -1.37
BRCA1-221ENST00000493795 VMO1Q7Z5L0 202 aa6.46□□□□□ -1.37
BRCA1-221ENST00000493795 SMIM10Q96HG1 83 aa6.46□□□□□ -1.37
BRCA1-221ENST00000493795 AGMATQ9BSE5 352 aa6.46□□□□□ -1.37
BRCA1-221ENST00000493795 CELA3BP08861 270 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 PRR31Q5SQ13 230 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 LINC01551Q86U37 167 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 USMG5Q96IX5 58 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 RNF5Q99942 180 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 GFRA4Q9GZZ7 299 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 SYNJ2BPP57105 145 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 WFDC9Q8NEX5 89 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 TP53TG1Q9Y2A0 90 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 IGHV2-26A0A0B4J1V2 119 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 TRAV1-1A0A0B4J248 108 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 SMKR1H3BMG3 65 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 RHODO00212 210 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 ANXA2RQ3ZCQ2 193 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 MINOS1Q5TGZ0 78 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 RFNGQ9Y644 331 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 MINOS1-NBL1R4GNA1 71 aa6.46□□□□□ -1.38
BRCA1-221ENST00000493795 C9orf118A6NHY6 69 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 COLCA2A8K830 154 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 OOSP1A8MZH6 123 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 NDPQ00604 133 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 Q8TAT8 98 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 BAALCQ8WXS3 180 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 CARD19Q96LW7 228 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 RNF114Q9Y508 228 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 I3L3M4 83 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 OR11H6Q8NGC7 330 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 MRPS18CQ9Y3D5 142 aaKnown RBP6.45□□□□□ -1.38
BRCA1-221ENST00000493795 PCM1Q15154 2024 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 FGF6P10767 208 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 DAD1P61803 113 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 KLRD1Q13241 179 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 TMEM256Q8N2U0 113 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 PIP4P2Q8N4L2 257 aa6.45□□□□□ -1.38
BRCA1-221ENST00000493795 CACNA1CQ13936 2221 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms