RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TMEM213A2RRL7 107 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 OR5H14A6NHG9 310 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 PCP4L1A6NKN8 68 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 RAB29O14966 203 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF780AO75290 641 aaPredicted RBP2.04□□□□□ -2.08
PTCD3-218ENST00000493430 DEDDO75618 318 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 IGKV1-39P01597 117 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 IGLV1-51P01701 117 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 APOA2P02652 100 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 IGKV1D-39P04432 117 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 IGF1P05019 195 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 MYL9P24844 172 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 HLA-DMAP28067 261 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 G6PCP35575 357 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 SERPINB10P48595 397 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 FHITP49789 147 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 ARHGDIBP52566 201 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 TAS2R20P59543 309 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 GNG2P59768 71 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 GABARAPL2P60520 117 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 MED21Q13503 144 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 KLF5Q13887 457 aaPredicted RBP2.04□□□□□ -2.08
PTCD3-218ENST00000493430 SPCS2Q15005 226 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 PRSS8Q16651 343 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 GUCA2BQ16661 112 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 HAGHQ16775 308 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 C9orf129Q5T035 196 aaKnown RBP2.04□□□□□ -2.08
PTCD3-218ENST00000493430 UBE2UQ5VVX9 321 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 CD200R1LQ6Q8B3 271 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF767PQ75MW2 155 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 MOB1BQ7L9L4 216 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 TMEM61Q8N0U2 210 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 LINC00518Q8N0U6 118 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 MS4A15Q8N5U1 240 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 SAMD12Q8N8I0 201 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 C8orf31Q8N9H6 132 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 UBAC2Q8NBM4 344 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 OR10A7Q8NGE5 316 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 OR4A4PQ8NGN8 299 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 OR6F1Q8NGZ6 308 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 OR10J5Q8NHC4 309 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 MRGPRFQ96AM1 343 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 YIPF6Q96EC8 236 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 CPNE2Q96FN4 548 aaPredicted RBP2.04□□□□□ -2.08
PTCD3-218ENST00000493430 UBE2E2Q96LR5 201 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 CHRDL1Q9BU40 450 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 PAXXQ9BUH6 204 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 MIXL1Q9H2W2 232 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 EDA2RQ9HAV5 297 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 SPACA1Q9HBV2 294 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 EHFQ9NZC4 300 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 PIPOXQ9P0Z9 390 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF221Q9UK13 617 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 LYSTQ99698 3801 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 TRAV1-2A0A0B4J238 106 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 HELTA6NFD8 242 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 OR2T8A6NH00 312 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 C2orf70A6NJV1 201 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 M0QZK8 103 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 ARL6IP5O75915 188 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 PPYP01298 95 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 HSPB1P04792 205 aaKnown RBP2.03□□□□□ -2.08
PTCD3-218ENST00000493430 OR8U8P0C7N1 319 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF735P0CB33 412 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 UBBP0CG47 229 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 TALDO1P37837 337 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 LPAR6P43657 344 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 RPL27AP46776 148 aaKnown RBP2.03□□□□□ -2.08
PTCD3-218ENST00000493430 WT1-ASQ06250 92 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 CDK10Q15131 360 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 DEFB135Q30KP9 77 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 SP6Q3SY56 376 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 LINC01620Q4KN68 170 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 CASC10Q5T4H9 136 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 AADACL3Q5VUY0 350 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 PYHIN1Q6K0P9 492 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 Q6ZRG5 221 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 PDPNQ86YL7 162 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 APRG1Q8IVJ8 170 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 PUSL1Q8N0Z8 303 aaKnown RBP2.03□□□□□ -2.08
PTCD3-218ENST00000493430 ARRDC1Q8N5I2 433 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF645Q8N7E2 425 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 OR9G4Q8NGQ1 327 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 OR5B3Q8NH48 314 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 LHFPL5Q8TAF8 219 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 GIMAP1Q8WWP7 306 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 PTX4Q96A99 478 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 FLYWCH2Q96CP2 140 aaKnown RBP2.03□□□□□ -2.08
PTCD3-218ENST00000493430 TSNAXQ99598 290 aaKnown RBP2.03□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF2Q9BSG1 426 aaPredicted RBP2.03□□□□□ -2.08
PTCD3-218ENST00000493430 GON7Q9BXV9 100 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 VCXQ9H320 206 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 RHOFQ9HBH0 211 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 HRASLSQ9HDD0 168 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 COMMD3Q9UBI1 195 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 ANXA10Q9UJ72 324 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 RAB22AQ9UL26 194 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 RAB26Q9ULW5 256 aa2.03□□□□□ -2.08
PTCD3-218ENST00000493430 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.09
PTCD3-218ENST00000493430 FRAS1Q86XX4 4008 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms