RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 SRSF12Q8WXF0 261 aaKnown RBP7.36□□□□□ -1.23
CSTF1-206ENST00000493039 HIST1H2BAQ96A08 127 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 C2orf50Q96LR7 162 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 JMJD8Q96S16 334 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 NPFFR1Q9GZQ6 430 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 SERTAD4Q9NUC0 356 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 SS18L2Q9UHA2 77 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 PRNDQ9UKY0 176 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 COL6A5A8TX70 2615 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 G3V318 75 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 M0R036 132 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 APELAP0DMC3 54 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 WT1-ASQ06250 92 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 SRSF4Q08170 494 aaKnown RBP7.36□□□□□ -1.23
CSTF1-206ENST00000493039 LGALSLQ3ZCW2 172 aaPredicted RBP7.36□□□□□ -1.23
CSTF1-206ENST00000493039 COL5A1-AS1Q5SY13 56 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 C19orf35Q6ZS72 473 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 OR10D4PQ8NGN7 298 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 ZNF257Q9Y2Q1 563 aa7.36□□□□□ -1.23
CSTF1-206ENST00000493039 PIGBOS1A0A0B4J2F0 54 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 IGLC7A0M8Q6 106 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 TMEM50AO95807 157 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 MBPP02686 304 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-206ENST00000493039 IGF1P05019 195 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 TIRAPP58753 221 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 RPL15P61313 204 aaKnown RBP7.35□□□□□ -1.23
CSTF1-206ENST00000493039 RNASEKQ6P5S7 137 aaKnown RBP7.35□□□□□ -1.23
CSTF1-206ENST00000493039 GSG1LQ6UXU4 331 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 SMIM20Q8N5G0 67 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 LFNGQ8NES3 379 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 OR1L8Q8NGR8 309 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 OR5B3Q8NH48 314 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 OR52E5Q8NH55 327 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 ARPC1AQ92747 370 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 PRSS22Q9GZN4 317 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 COMMD5Q9GZQ3 224 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 WSB1Q9Y6I7 421 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 A0A1W2PRX2 142 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 PHOX2AO14813 284 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 VDAC2P45880 294 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-206ENST00000493039 RPL27AP46776 148 aaKnown RBP7.35□□□□□ -1.23
CSTF1-206ENST00000493039 CRIP2P52943 208 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-206ENST00000493039 PRCDQ00LT1 54 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 KIAA0141Q14154 515 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-206ENST00000493039 C10orf91Q5T1B1 145 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 UQCC3Q6UW78 93 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 C10orf99Q6UWK7 81 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 SLC35E3Q7Z769 313 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 OR1S1Q8NH92 325 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 SGMS2Q8NHU3 365 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 LINC01006Q8NI28 216 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 SSBP4Q9BWG4 385 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-206ENST00000493039 PARP11Q9NR21 331 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 FKBP11Q9NYL4 201 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 RFNGQ9Y644 331 aa7.35□□□□□ -1.23
CSTF1-206ENST00000493039 TGIF2-C20orf24A0A0A6YYL0 155 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 TMEM218A2RU14 115 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 G3V3Q6 166 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 H0YIZ8 118 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 CORTO00230 105 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 PDE6DO43924 150 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 GNG7O60262 68 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 MT-ND4LP03901 98 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 PPIFP30405 207 aaKnown RBP7.34□□□□□ -1.23
CSTF1-206ENST00000493039 PAX9P55771 341 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 CFHR3Q02985 330 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 TMEM170AQ8WVE7 144 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 RBKSQ9H477 322 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 C11orf1Q9H5F2 150 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 RCL1Q9Y2P8 373 aaKnown RBP7.34□□□□□ -1.23
CSTF1-206ENST00000493039 CARHSP1Q9Y2V2 147 aaKnown RBP7.34□□□□□ -1.23
CSTF1-206ENST00000493039 UFC1Q9Y3C8 167 aa7.34□□□□□ -1.23
CSTF1-206ENST00000493039 AMBPP02760 352 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 MRPL23Q16540 153 aaKnown RBP7.33□□□□□ -1.24
CSTF1-206ENST00000493039 ACSM6Q6P461 480 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 C1QL4Q86Z23 238 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 OR4C5Q8NGB2 326 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 OCC1Q8TAD7 63 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 WIPF2Q8TF74 440 aaPredicted RBP7.33□□□□□ -1.24
CSTF1-206ENST00000493039 SPIN2AQ99865 258 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 SPIN2BQ9BPZ2 258 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 NMES1Q9C002 83 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 WNT10AQ9GZT5 417 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 C16orf95Q9H693 158 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 FAM90A26D6RGX4 464 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 INS-IGF2F8WCM5 200 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 K7EPK0 472 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 NDUFA7O95182 113 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 REG1AP05451 166 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 NKX2-1P43699 371 aaPredicted RBP7.33□□□□□ -1.24
CSTF1-206ENST00000493039 MFAP2P55001 183 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.33□□□□□ -1.24
CSTF1-206ENST00000493039 PPP1R1CQ8WVI7 109 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 MCRIP2Q9BUT9 160 aaKnown RBP7.33□□□□□ -1.24
CSTF1-206ENST00000493039 RNF126Q9BV68 326 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 PSG8Q9UQ74 426 aa7.33□□□□□ -1.24
CSTF1-206ENST00000493039 ZNF561-AS1K7EIQ3 104 aa7.32□□□□□ -1.24
CSTF1-206ENST00000493039 SYNGR2O43760 224 aa7.32□□□□□ -1.24
CSTF1-206ENST00000493039 OR13C7P0DN81 318 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms