RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 GDF5OSQ5U4N7 250 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 CNIH2Q6PI25 160 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 LINC00173Q6ZV60 143 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 CTAGE3PQ8IX95 158 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 PDIK1LQ8N165 341 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 LINC00337Q8N6G1 96 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 DUSP18Q8NEJ0 188 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 LYPD6BQ8NI32 183 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 FAM81AQ8TBF8 368 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 SPACA4Q8TDM5 124 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 SRSF12Q8WXF0 261 aaKnown RBP2.13□□□□□ -2.07
UBR4-215ENST00000492606 MCUR1Q96AQ8 359 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 PHYHIPLQ96FC7 376 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 RNF185Q96GF1 192 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 AUNIPQ9H7T9 357 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 ING4Q9UNL4 249 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 FIS1Q9Y3D6 152 aa2.13□□□□□ -2.07
UBR4-215ENST00000492606 V9GYY5 206 aaPredicted RBP2.13□□□□□ -2.07
UBR4-215ENST00000492606 TRAV1-1A0A0B4J248 108 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 A6NIN4 97 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 ZNF878C9JN71 531 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 WBP4O75554 376 aaKnown RBP2.12□□□□□ -2.07
UBR4-215ENST00000492606 RBBP9O75884 186 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 ZNF682O95780 498 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 ISG15P05161 165 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 SAA2P0DJI9 122 aaPredicted RBP2.12□□□□□ -2.07
UBR4-215ENST00000492606 DCKP27707 260 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 CRABP1P29762 137 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 SUB1P53999 127 aaKnown RBP eCLIP2.12□□□□□ -2.07
UBR4-215ENST00000492606 CLDN12P56749 244 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 KRTAP10-7P60409 375 aaPredicted RBP2.12□□□□□ -2.07
UBR4-215ENST00000492606 MRPS15P82914 257 aaKnown RBP2.12□□□□□ -2.07
UBR4-215ENST00000492606 YIF1BQ5BJH7 314 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 LINC01556Q5JQF7 62 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 PSMG4Q5JS54 123 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 TMEM42Q69YG0 159 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 REEP3Q6NUK4 255 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 OR4A4PQ8NGN8 299 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 Q8TAT8 98 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 FANK1Q8TC84 345 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 MARCH1Q8TCQ1 289 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 DCANP1Q8TF63 244 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 TMEM239Q8WW34 195 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 CDKL2Q92772 493 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 MRPS24Q96EL2 167 aaKnown RBP2.12□□□□□ -2.07
UBR4-215ENST00000492606 L3HYPDHQ96EM0 354 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 TSNAXQ99598 290 aaKnown RBP2.12□□□□□ -2.07
UBR4-215ENST00000492606 RNF5Q99942 180 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 KCTD14Q9BQ13 255 aaPredicted RBP2.12□□□□□ -2.07
UBR4-215ENST00000492606 HMG20AQ9NP66 347 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 NOP10Q9NPE3 64 aaKnown RBP2.12□□□□□ -2.07
UBR4-215ENST00000492606 ZNF257Q9Y2Q1 563 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 WASHC3Q9Y3C0 194 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 ICOSQ9Y6W8 199 aa2.12□□□□□ -2.07
UBR4-215ENST00000492606 TRBV7-1A0A0A6YYK4 115 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 DHRS12A0PJE2 317 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 KLLNB2CW77 178 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 WRBO00258 174 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 PPP1R2P9O14990 202 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 IGHV3-30P01768 117 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 IGHV3-33P01772 117 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 IGHV3-30-3P0DP02 117 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 IGHV3-30-5P0DP03 117 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 IFI30P13284 250 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 HLA-DRB4P13762 266 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 CRISP2P16562 243 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 HSD11B1P28845 292 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 TSPOP30536 169 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 RPL39P5Q59GN2 51 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 C10orf55Q5SWW7 151 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 GLT8D1Q68CQ7 371 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 C22orf42Q6IC83 251 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 CCNYL1Q8N7R7 359 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 GPR32P1Q8NGA4 272 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 OR10R2Q8NGX6 335 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 OR10J6PQ8NGY7 276 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 OR2G3Q8NGZ4 309 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 DGCR14Q96DF8 476 aaKnown RBP2.11□□□□□ -2.07
UBR4-215ENST00000492606 ZC2HC1AQ96GY0 325 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 DNAJC30Q96LL9 226 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 IGF2BP2-AS1Q96M15 143 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 VSIRQ9H7M9 311 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 GPR84Q9NQS5 396 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 SLC25A37Q9NYZ2 338 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 DNAJC15Q9Y5T4 150 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 IER3IP1Q9Y5U9 82 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 HLA-DRB4X5D2U9 266 aa2.11□□□□□ -2.07
UBR4-215ENST00000492606 IGKV1-12A0A0C4DH73 117 aa2.1□□□□□ -2.07
UBR4-215ENST00000492606 SMCO3A2RU48 225 aa2.1□□□□□ -2.07
UBR4-215ENST00000492606 OR5H14A6NHG9 310 aa2.1□□□□□ -2.07
UBR4-215ENST00000492606 PEX7O00628 323 aa2.1□□□□□ -2.07
UBR4-215ENST00000492606 DEGS1O15121 323 aa2.1□□□□□ -2.07
UBR4-215ENST00000492606 KRT75O95678 551 aa2.1□□□□□ -2.07
UBR4-215ENST00000492606 INSP01308 110 aa2.1□□□□□ -2.07
UBR4-215ENST00000492606 GZMHP20718 246 aa2.1□□□□□ -2.07
UBR4-215ENST00000492606 SLC2A5P22732 501 aa2.1□□□□□ -2.07
UBR4-215ENST00000492606 PHBP35232 272 aa2.1□□□□□ -2.07
UBR4-215ENST00000492606 HRH1P35367 487 aa2.1□□□□□ -2.07
UBR4-215ENST00000492606 GPX4P36969 197 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms