RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 IGKV1OR2-108A0A075B7D4 117 aa12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 SMCO3A2RU48 225 aa12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 SSNA1O43805 119 aa12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 CD5P06127 495 aa12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 PVALBP20472 110 aaPredicted RBP12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 DLK1P80370 383 aa12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 USF2Q15853 346 aaPredicted RBP12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 FAM90A2PQ658T7 463 aa12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 TCF24Q7RTU0 167 aa12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 RNF125Q96EQ8 232 aa12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 C11orf1Q9H5F2 150 aa12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 TUBA4BQ9H853 241 aa12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 C19orf73Q9NVV2 129 aa12.19□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 OR4C46A6NHA9 309 aa12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 OR11H12B2RN74 326 aa12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 FNDC10F2Z333 226 aa12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 BCAP31P51572 246 aa12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 RRAS2P62070 204 aaPredicted RBP12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 TMEM144Q7Z5S9 345 aa12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 LILRB2Q8N423 598 aa12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 GRAMD2BQ96HH9 432 aa12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 ASCL2Q99929 193 aa12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 NMES1Q9C002 83 aa12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 WFDC10AQ9H1F0 79 aa12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 RABAC1Q9UI14 185 aa12.18□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 IGKV3-7A0A075B6H7 116 aa12.17□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 DFFBO76075 338 aa12.17□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 P2RY1P47900 373 aa12.17□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 CAV2P51636 162 aa12.17□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 PAFAH1B2P68402 229 aa12.17□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 OR2F1Q13607 317 aa12.17□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 DEFB125Q8N687 156 aa12.17□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 PBDC1Q9BVG4 233 aa12.17□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 MGAT4CQ9UBM8 478 aa12.17□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 U3KQE9 123 aa12.17□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 NHLRC4P0CG21 123 aaPredicted RBP12.16□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 LYZP61626 148 aa12.16□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 CYCSP99999 105 aaKnown RBP12.16□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 ARL16Q0P5N6 197 aa12.16□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 SBSPONQ8IVN8 264 aa12.16□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 SRD5A3Q9H8P0 318 aa12.16□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 LYRM2Q9NU23 88 aaPredicted RBP12.16□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 ALG5Q9Y673 324 aa12.16□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 FAM24AA6NFZ4 105 aa12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 DEDDO75618 318 aa12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 CFDP00746 253 aaPredicted RBP12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 NUP62P37198 522 aaPredicted RBP12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 TFPI2P48307 235 aa12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 EIF2B2P49770 351 aaKnown RBP12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 H2BFSP57053 126 aa12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 RPL11P62913 178 aaKnown RBP12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 SLC38A11Q08AI6 406 aa12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 C16orf54Q6UWD8 224 aa12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 GBGT1Q8N5D6 347 aa12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 BPIFCQ8NFQ6 507 aa12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 GLMPQ8WWB7 406 aa12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 NPVFQ9HCQ7 196 aa12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 UBQLN2Q9UHD9 624 aa12.15□□□□□ -0.46
MSH5-SAPCD1-206ENST00000491552 DNASE2O00115 360 aaPredicted RBP12.14□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 CST7O76096 145 aa12.14□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 RLN2P04090 185 aa12.14□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 ODF3L2Q3SX64 289 aa12.14□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 LRRC37A5PQ49AS3 106 aa12.14□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 CYP2G1PQ6ZSU1 146 aa12.14□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 MS4A6AQ9H2W1 248 aa12.14□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 PFDN2Q9UHV9 154 aa12.14□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 TRAV2A0A0B4J234 112 aa12.13□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 IGSF23A1L1A6 192 aa12.13□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 HELTA6NFD8 242 aa12.13□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 BUB3O43684 328 aa12.13□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 SULT1A1P50225 295 aa12.13□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 RGS21Q2M5E4 152 aa12.13□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 TEPPQ6URK8 271 aa12.13□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 STX12Q86Y82 276 aa12.13□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 WFDC3Q8IUB2 231 aa12.13□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 TMEM252Q8N6L7 170 aa12.13□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 FAM110AQ9BQ89 295 aa12.13□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 RBMY1BA6NDE4 496 aaKnown RBP12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 RBMY1EA6NEQ0 496 aaKnown RBP12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 E5RGE8 158 aa12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 RBMY1DP0C7P1 496 aaKnown RBP12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 GATA2P23769 480 aaPredicted RBP12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 CMC4P56277 68 aaPredicted RBP12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 SELENOTP62341 195 aa12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 TMEM182Q6ZP80 229 aaPredicted RBP12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 TMEM217Q8N7C4 229 aa12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 STXBP6Q8NFX7 210 aa12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 PPP1R14BQ96C90 147 aa12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 OR5AC2Q9NZP5 309 aa12.12□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 PET100P0DJ07 73 aa12.11□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 AP2S1P53680 142 aaPredicted RBP12.11□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 HBG1P69891 147 aa12.11□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 HBG2P69892 147 aa12.11□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 LINC00322Q6ZN03 302 aaPredicted RBP12.11□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 PPP1R1CQ8WVI7 109 aa12.11□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 CITED4Q96RK1 184 aa12.11□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 SLC45A2Q9UMX9 530 aa12.11□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 DNAH9Q9NYC9 4486 aa12.1□□□□□ -0.47
MSH5-SAPCD1-206ENST00000491552 H0YIZ8 118 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms