RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 OR11H6Q8NGC7 330 aa18.16■□□□□ 0.5
USF3-203ENST00000491165 CMTM2Q8TAZ6 248 aa18.16■□□□□ 0.5
USF3-203ENST00000491165 MS4A10Q96PG2 267 aa18.16■□□□□ 0.5
USF3-203ENST00000491165 TECRQ9NZ01 308 aaKnown RBP18.16■□□□□ 0.5
USF3-203ENST00000491165 ODF3BA8MYP8 253 aa18.16■□□□□ 0.5
USF3-203ENST00000491165 IGKV1-16P04430 117 aa18.16■□□□□ 0.5
USF3-203ENST00000491165 IGHV4-38-2P0DP08 117 aa18.16■□□□□ 0.5
USF3-203ENST00000491165 ATP5IP56385 69 aaPredicted RBP18.16■□□□□ 0.5
USF3-203ENST00000491165 LGALS4P56470 323 aa18.16■□□□□ 0.5
USF3-203ENST00000491165 TAS2R60P59551 318 aa18.16■□□□□ 0.5
USF3-203ENST00000491165 RPEL1Q2QD12 228 aa18.16■□□□□ 0.5
USF3-203ENST00000491165 TRAV40A0A0B4J280 105 aa18.15■□□□□ 0.5
USF3-203ENST00000491165 GRIFINA4D1Z8 144 aa18.15■□□□□ 0.5
USF3-203ENST00000491165 GATA3P23771 443 aa18.15■□□□□ 0.5
USF3-203ENST00000491165 GNG4P50150 75 aa18.15■□□□□ 0.5
USF3-203ENST00000491165 ERVFC1-1P60608 527 aa18.15■□□□□ 0.5
USF3-203ENST00000491165 LHFPL4Q7Z7J7 247 aa18.15■□□□□ 0.5
USF3-203ENST00000491165 LINC00311Q8N616 119 aa18.15■□□□□ 0.5
USF3-203ENST00000491165 MRPL18Q9H0U6 180 aaKnown RBP18.15■□□□□ 0.5
USF3-203ENST00000491165 TEX50A0A1B0GTY4 177 aa18.14■□□□□ 0.5
USF3-203ENST00000491165 SRRM4A7MD48 611 aaKnown RBP18.14■□□□□ 0.5
USF3-203ENST00000491165 C2orf83Q53S99 150 aa18.14■□□□□ 0.5
USF3-203ENST00000491165 KLF17Q5JT82 389 aaPredicted RBP18.14■□□□□ 0.5
USF3-203ENST00000491165 MOB3BQ86TA1 216 aa18.14■□□□□ 0.5
USF3-203ENST00000491165 C8orf31Q8N9H6 132 aa18.14■□□□□ 0.5
USF3-203ENST00000491165 OR1L6Q8NGR2 347 aa18.14■□□□□ 0.5
USF3-203ENST00000491165 HELTA6NFD8 242 aa18.14■□□□□ 0.49
USF3-203ENST00000491165 SNRPCP09234 159 aaKnown RBP18.14■□□□□ 0.49
USF3-203ENST00000491165 CENPWQ5EE01 88 aa18.14■□□□□ 0.49
USF3-203ENST00000491165 MMD2Q8IY49 270 aa18.14■□□□□ 0.49
USF3-203ENST00000491165 PIP4P2Q8N4L2 257 aa18.14■□□□□ 0.49
USF3-203ENST00000491165 OR10X1Q8NGY0 326 aa18.14■□□□□ 0.49
USF3-203ENST00000491165 MISP3Q96FF7 219 aa18.14■□□□□ 0.49
USF3-203ENST00000491165 NAGKQ9UJ70 344 aa18.14■□□□□ 0.49
USF3-203ENST00000491165 IGKV1OR2-108A0A075B7D4 117 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 RUSC1-AS1Q66K80 236 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 PQLC2Q6ZP29 291 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 OR5B3Q8NH48 314 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 ST6GALNAC6Q969X2 333 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 C19orf24Q9BVV8 132 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 BET1LQ9NYM9 111 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 V9GYV3 84 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 BUB1B-PAK6H3BSN5 160 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 CRYBB3P26998 211 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 OR10J1P30954 320 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 REG1BP48304 166 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 OR5I1Q13606 314 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 USF2Q15853 346 aaPredicted RBP18.13■□□□□ 0.49
USF3-203ENST00000491165 BRD3OSQ6XYD6 125 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 OR1L8Q8NGR8 309 aa18.13■□□□□ 0.49
USF3-203ENST00000491165 SOX21Q9Y651 276 aaPredicted RBP18.13■□□□□ 0.49
USF3-203ENST00000491165 OR7C2O60412 319 aa18.12■□□□□ 0.49
USF3-203ENST00000491165 SAA1P0DJI8 122 aaPredicted RBP18.12■□□□□ 0.49
USF3-203ENST00000491165 CRISP2P16562 243 aa18.12■□□□□ 0.49
USF3-203ENST00000491165 UBE2E1P51965 193 aa18.12■□□□□ 0.49
USF3-203ENST00000491165 TAS2R45P59539 299 aa18.12■□□□□ 0.49
USF3-203ENST00000491165 AJUBAQ96IF1 538 aa18.12■□□□□ 0.49
USF3-203ENST00000491165 OR5G3P0C626 314 aa18.11■□□□□ 0.49
USF3-203ENST00000491165 OR10J4P0C629 311 aa18.11■□□□□ 0.49
USF3-203ENST00000491165 TPPP2P59282 170 aa18.11■□□□□ 0.49
USF3-203ENST00000491165 PAFAH1B2P68402 229 aa18.11■□□□□ 0.49
USF3-203ENST00000491165 DYNAPQ8N1N2 210 aa18.11■□□□□ 0.49
USF3-203ENST00000491165 ZNF503Q96F45 646 aa18.11■□□□□ 0.49
USF3-203ENST00000491165 TP53TG3Q9ULZ0 132 aa18.11■□□□□ 0.49
USF3-203ENST00000491165 FCN1O00602 326 aa18.11■□□□□ 0.49
USF3-203ENST00000491165 RNASE2P10153 161 aaKnown RBP18.11■□□□□ 0.49
USF3-203ENST00000491165 GATA2P23769 480 aaPredicted RBP18.11■□□□□ 0.49
USF3-203ENST00000491165 IER3P46695 156 aa18.11■□□□□ 0.49
USF3-203ENST00000491165 TRBV9A0A0B4J1U6 114 aa18.1■□□□□ 0.49
USF3-203ENST00000491165 LY6LH3BQJ8 138 aa18.1■□□□□ 0.49
USF3-203ENST00000491165 ESDP10768 282 aa18.1■□□□□ 0.49
USF3-203ENST00000491165 ZNF137PP52743 207 aa18.1■□□□□ 0.49
USF3-203ENST00000491165 PRRX1P54821 245 aa18.1■□□□□ 0.49
USF3-203ENST00000491165 C1orf194Q5T5A4 169 aa18.1■□□□□ 0.49
USF3-203ENST00000491165 ZNF833PQ6ZTB9 187 aa18.1■□□□□ 0.49
USF3-203ENST00000491165 J3QLI3 93 aa18.1■□□□□ 0.49
USF3-203ENST00000491165 SAA4P35542 130 aa18.1■□□□□ 0.49
USF3-203ENST00000491165 OR8I2Q8N0Y5 310 aa18.1■□□□□ 0.49
USF3-203ENST00000491165 OSR1Q8TAX0 266 aaPredicted RBP18.1■□□□□ 0.49
USF3-203ENST00000491165 SNURFLB1AK76 121 aa18.09■□□□□ 0.49
USF3-203ENST00000491165 APOA2P02652 100 aa18.09■□□□□ 0.49
USF3-203ENST00000491165 RANP62826 216 aaKnown RBP18.09■□□□□ 0.49
USF3-203ENST00000491165 RPL19P84098 196 aaKnown RBP18.09■□□□□ 0.49
USF3-203ENST00000491165 CD69Q07108 199 aa18.09■□□□□ 0.49
USF3-203ENST00000491165 TIGITQ495A1 244 aa18.09■□□□□ 0.49
USF3-203ENST00000491165 KIR2DL5BA0A0G2JN68 375 aa18.08■□□□□ 0.49
USF3-203ENST00000491165 KIR2DL5BA0A0G2JPC4 375 aa18.08■□□□□ 0.49
USF3-203ENST00000491165 GGTLC3B5MD39 225 aa18.08■□□□□ 0.49
USF3-203ENST00000491165 CD5LO43866 347 aa18.08■□□□□ 0.49
USF3-203ENST00000491165 LINC00310P59036 64 aa18.08■□□□□ 0.49
USF3-203ENST00000491165 KIR2DL5AQ8N109 375 aa18.08■□□□□ 0.49
USF3-203ENST00000491165 OR10W1Q8NGF6 305 aa18.08■□□□□ 0.49
USF3-203ENST00000491165 GNB1LQ9BYB4 327 aa18.08■□□□□ 0.49
USF3-203ENST00000491165 MRPL20Q9BYC9 149 aaKnown RBP18.08■□□□□ 0.49
USF3-203ENST00000491165 IGHV1-69DA0A0B4J2H0 117 aa18.08■□□□□ 0.48
USF3-203ENST00000491165 SERF1AO75920 110 aa18.08■□□□□ 0.48
USF3-203ENST00000491165 IGHV1-69P01742 117 aa18.08■□□□□ 0.48
USF3-203ENST00000491165 HARBI1Q96MB7 349 aa18.08■□□□□ 0.48
USF3-203ENST00000491165 TMUB1Q9BVT8 246 aa18.08■□□□□ 0.48
USF3-203ENST00000491165 COMMD5Q9GZQ3 224 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms