RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 C10orf55Q5SWW7 151 aa8.12□□□□□ -1.11
HDAC9-225ENST00000490851 SP5Q6BEB4 398 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-225ENST00000490851 ZNF429Q86V71 674 aa8.12□□□□□ -1.11
HDAC9-225ENST00000490851 FAM168AQ92567 244 aa8.12□□□□□ -1.11
HDAC9-225ENST00000490851 PRNDQ9UKY0 176 aa8.12□□□□□ -1.11
HDAC9-225ENST00000490851 CSMD1Q96PZ7 3565 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 KBTBD11O94819 623 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 PSG1P11464 419 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 CD24P25063 80 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 VDAC2P45880 294 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-225ENST00000490851 LMO4P61968 165 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 SRSF3P84103 164 aaKnown RBP8.11□□□□□ -1.11
HDAC9-225ENST00000490851 FAM78BQ5VT40 261 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 ACSM6Q6P461 480 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 OR8I2Q8N0Y5 310 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 SPANXA1Q9NS26 97 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 AMMECR1Q9Y4X0 333 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-225ENST00000490851 DOPEY2Q9Y3R5 2298 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 TEX50A0A1B0GTY4 177 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 M0R1W7 72 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 HTR1DP28221 377 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 SEC61GP60059 68 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 GNPNAT1Q96EK6 184 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-225ENST00000490851 COMMD5Q9GZQ3 224 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 PLEKHA3Q9HB20 300 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 BET1LQ9NYM9 111 aa8.11□□□□□ -1.11
HDAC9-225ENST00000490851 GAGE12BA1L429 117 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 PMS2P5A8MQ11 134 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 TIMM23O14925 209 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 IGLV2-23P01705 113 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 APELAP0DMC3 54 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 PRTN3P24158 256 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 RPL8P62917 257 aaKnown RBP8.1□□□□□ -1.11
HDAC9-225ENST00000490851 SMAGPQ0VAQ4 97 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 HCP5Q6MZN7 132 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 TMEM170AQ8WVE7 144 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 PSMG3Q9BT73 122 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-225ENST00000490851 ABCA1O95477 2261 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 IGHV4-61A0A0C4DH41 118 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 FAM157AC9JC47 383 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 OR2C1O95371 312 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 CA2P00918 260 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 DVL1P1P54792 670 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-225ENST00000490851 GNB1P62873 340 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 LRRC75BQ2VPJ9 315 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 VMA21Q3ZAQ7 101 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 ERASQ7Z444 233 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 FER1L6-AS1Q8NA97 138 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 TMEM147Q9BVK8 224 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 WDR61Q9GZS3 305 aaKnown RBP8.1□□□□□ -1.11
HDAC9-225ENST00000490851 VSIRQ9H7M9 311 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 PARP11Q9NR21 331 aa8.1□□□□□ -1.11
HDAC9-225ENST00000490851 IGHV4-30-2A0A087WSY4 118 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 A0A1W2PPI3 338 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 E7EUB6 86 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 CRYGBP07316 175 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 HOXB4P17483 251 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-225ENST00000490851 NPY1RP25929 384 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 PAFAH1B2P68402 229 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 PRCDQ00LT1 54 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 BTNL8Q6UX41 500 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 TAF15Q92804 592 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC9-225ENST00000490851 MAP1LC3CQ9BXW4 147 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 DPM3Q9P2X0 92 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 ZANQ9Y493 2812 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 LOC102724200A0A096LPH7 203 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-225ENST00000490851 USF1P22415 310 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-225ENST00000490851 HES1Q14469 280 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 OR11H6Q8NGC7 330 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 GPR82Q96P67 336 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 CDC42EP3Q9UKI2 254 aa8.09□□□□□ -1.11
HDAC9-225ENST00000490851 LY6LH3BQJ8 138 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 VENTXO95231 258 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 REG1AP05451 166 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 TRGC1P0CF51 173 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 LGALS4P56470 323 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 PLGLAQ15195 96 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 RNASEKQ6P5S7 137 aaKnown RBP8.08□□□□□ -1.12
HDAC9-225ENST00000490851 VSTM2AQ8TAG5 236 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 TMEM167AQ8TBQ9 72 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 C10orf105Q8TEF2 133 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 TMEM18Q96B42 140 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 FBXL15Q9H469 300 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 FKBP11Q9NYL4 201 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 IGHV3OR16-10A0A075B7F0 116 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 ODF3BA8MYP8 253 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 SNCAP37840 140 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 ZNF787Q6DD87 383 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 DYNAPQ8N1N2 210 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 OR1L8Q8NGR8 309 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 OR5B3Q8NH48 314 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 SIRPDQ9H106 197 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 MRPL16Q9NX20 251 aaKnown RBP8.08□□□□□ -1.12
HDAC9-225ENST00000490851 ZNF257Q9Y2Q1 563 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 LAMTOR2Q9Y2Q5 125 aa8.08□□□□□ -1.12
HDAC9-225ENST00000490851 SMIM9A6NGZ8 99 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 UMAD1C9J7I0 102 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 ACTL6BO94805 426 aa8.07□□□□□ -1.12
HDAC9-225ENST00000490851 IGKV1D-33P01593 117 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms