RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 SYNGR2O43760 224 aa14.54□□□□□ -0.08
SMC4-222ENST00000490207 OR4E1P0C645 316 aa14.54□□□□□ -0.08
SMC4-222ENST00000490207 DHRS2Q13268 280 aa14.54□□□□□ -0.08
SMC4-222ENST00000490207 LYG2Q86SG7 212 aa14.54□□□□□ -0.08
SMC4-222ENST00000490207 OR51G1Q8NGK1 321 aa14.54□□□□□ -0.08
SMC4-222ENST00000490207 COQ8AQ8NI60 647 aa14.54□□□□□ -0.08
SMC4-222ENST00000490207 RNF125Q96EQ8 232 aa14.54□□□□□ -0.08
SMC4-222ENST00000490207 RYR2Q92736 4967 aa14.53□□□□□ -0.08
SMC4-222ENST00000490207 LCE6AA0A183 80 aa14.53□□□□□ -0.08
SMC4-222ENST00000490207 WRBO00258 174 aa14.53□□□□□ -0.08
SMC4-222ENST00000490207 ADAP1O75689 374 aa14.53□□□□□ -0.08
SMC4-222ENST00000490207 ANXA7P20073 488 aaKnown RBP14.53□□□□□ -0.08
SMC4-222ENST00000490207 RPP30P78346 268 aaKnown RBP14.53□□□□□ -0.08
SMC4-222ENST00000490207 DCANP1Q8TF63 244 aa14.53□□□□□ -0.08
SMC4-222ENST00000490207 IGKV1D-37A0A075B6S9 117 aa14.52□□□□□ -0.09
SMC4-222ENST00000490207 ZNF688P0C7X2 276 aa14.52□□□□□ -0.09
SMC4-222ENST00000490207 ZNF90Q03938 601 aa14.52□□□□□ -0.09
SMC4-222ENST00000490207 C4orf46Q504U0 113 aa14.52□□□□□ -0.09
SMC4-222ENST00000490207 PBDC1Q9BVG4 233 aa14.52□□□□□ -0.09
SMC4-222ENST00000490207 CA1P00915 261 aaPredicted RBP14.51□□□□□ -0.09
SMC4-222ENST00000490207 IFNA21P01568 189 aa14.51□□□□□ -0.09
SMC4-222ENST00000490207 FABP1P07148 127 aa14.51□□□□□ -0.09
SMC4-222ENST00000490207 NUP62P37198 522 aaPredicted RBP14.51□□□□□ -0.09
SMC4-222ENST00000490207 AP2S1P53680 142 aaPredicted RBP14.51□□□□□ -0.09
SMC4-222ENST00000490207 OR8G2PQ6IF36 304 aa14.51□□□□□ -0.09
SMC4-222ENST00000490207 SIGLEC15Q6ZMC9 328 aa14.51□□□□□ -0.09
SMC4-222ENST00000490207 STHQ8IWL8 128 aa14.51□□□□□ -0.09
SMC4-222ENST00000490207 TENM2Q9NT68 2774 aa14.51□□□□□ -0.09
SMC4-222ENST00000490207 ALMS1Q8TCU4 4167 aa14.5□□□□□ -0.09
SMC4-222ENST00000490207 H3BP45 60 aa14.5□□□□□ -0.09
SMC4-222ENST00000490207 BUB3O43684 328 aa14.5□□□□□ -0.09
SMC4-222ENST00000490207 LYZP61626 148 aa14.5□□□□□ -0.09
SMC4-222ENST00000490207 CNPY1Q3B7I2 92 aa14.5□□□□□ -0.09
SMC4-222ENST00000490207 SPANXN5Q5MJ07 72 aa14.5□□□□□ -0.09
SMC4-222ENST00000490207 GATAD1Q8WUU5 269 aa14.5□□□□□ -0.09
SMC4-222ENST00000490207 TRGV9Q99603 122 aa14.5□□□□□ -0.09
SMC4-222ENST00000490207 C20orf85Q9H1P6 137 aa14.5□□□□□ -0.09
SMC4-222ENST00000490207 PRSS46E5RG02 174 aa14.49□□□□□ -0.09
SMC4-222ENST00000490207 LYRM1O43325 122 aa14.49□□□□□ -0.09
SMC4-222ENST00000490207 NKX2-1P43699 371 aaPredicted RBP14.49□□□□□ -0.09
SMC4-222ENST00000490207 THAP8Q8NA92 274 aa14.49□□□□□ -0.09
SMC4-222ENST00000490207 NRN1Q9NPD7 142 aa14.49□□□□□ -0.09
SMC4-222ENST00000490207 PFDN2Q9UHV9 154 aa14.49□□□□□ -0.09
SMC4-222ENST00000490207 STRAPQ9Y3F4 350 aaKnown RBP14.49□□□□□ -0.09
SMC4-222ENST00000490207 PLECQ15149 4684 aaKnown RBP14.48□□□□□ -0.09
SMC4-222ENST00000490207 PLA2G10O15496 165 aa14.48□□□□□ -0.09
SMC4-222ENST00000490207 POLR2GP62487 172 aaKnown RBP eCLIP14.48□□□□□ -0.09
SMC4-222ENST00000490207 EWSR1Q01844 656 aaKnown RBP eCLIP14.48□□□□□ -0.09
SMC4-222ENST00000490207 ID3Q02535 119 aa14.48□□□□□ -0.09
SMC4-222ENST00000490207 OR2F1Q13607 317 aa14.48□□□□□ -0.09
SMC4-222ENST00000490207 PMS2P11Q13670 270 aa14.48□□□□□ -0.09
SMC4-222ENST00000490207 PSMG4Q5JS54 123 aa14.48□□□□□ -0.09
SMC4-222ENST00000490207 TRPT1Q86TN4 253 aaKnown RBP14.48□□□□□ -0.09
SMC4-222ENST00000490207 OR4D5Q8NGN0 318 aa14.48□□□□□ -0.09
SMC4-222ENST00000490207 DNAH1Q9P2D7 4330 aa14.47□□□□□ -0.09
SMC4-222ENST00000490207 AGRNO00468 2067 aa14.47□□□□□ -0.09
SMC4-222ENST00000490207 IGKV1OR2-108A0A075B7D4 117 aa14.47□□□□□ -0.09
SMC4-222ENST00000490207 KNCNA6PVL3 124 aa14.47□□□□□ -0.09
SMC4-222ENST00000490207 SSSCA1O60232 199 aa14.47□□□□□ -0.09
SMC4-222ENST00000490207 TMEM217Q8N7C4 229 aa14.47□□□□□ -0.09
SMC4-222ENST00000490207 RARRES2Q99969 163 aa14.47□□□□□ -0.09
SMC4-222ENST00000490207 CXorf65A6NEN9 183 aa14.46□□□□□ -0.09
SMC4-222ENST00000490207 SNRPGP15A8MWD9 76 aa14.46□□□□□ -0.09
SMC4-222ENST00000490207 JTBO76095 146 aa14.46□□□□□ -0.09
SMC4-222ENST00000490207 SCGB1D2O95969 90 aa14.46□□□□□ -0.09
SMC4-222ENST00000490207 ATF4P18848 351 aaPredicted RBP14.46□□□□□ -0.09
SMC4-222ENST00000490207 SNRPD3P62318 126 aaKnown RBP14.46□□□□□ -0.09
SMC4-222ENST00000490207 AKR1C1Q04828 323 aa14.46□□□□□ -0.09
SMC4-222ENST00000490207 ACTL10Q5JWF8 245 aa14.46□□□□□ -0.09
SMC4-222ENST00000490207 ACOT7LQ6ZUV0 252 aa14.46□□□□□ -0.09
SMC4-222ENST00000490207 MITD1Q8WV92 249 aa14.46□□□□□ -0.09
SMC4-222ENST00000490207 CCDC32Q9BV29 185 aa14.46□□□□□ -0.09
SMC4-222ENST00000490207 PSENENQ9NZ42 101 aa14.46□□□□□ -0.09
SMC4-222ENST00000490207 SPP1P10451 314 aa14.45□□□□□ -0.1
SMC4-222ENST00000490207 IAH1Q2TAA2 248 aaPredicted RBP14.45□□□□□ -0.1
SMC4-222ENST00000490207 MORN3Q6PF18 240 aaPredicted RBP14.45□□□□□ -0.1
SMC4-222ENST00000490207 OR11H2Q8NH07 326 aa14.45□□□□□ -0.1
SMC4-222ENST00000490207 PPP1R14BQ96C90 147 aa14.45□□□□□ -0.1
SMC4-222ENST00000490207 SEPSECSQ9HD40 501 aaKnown RBP14.45□□□□□ -0.1
SMC4-222ENST00000490207 FBXL17Q9UF56 701 aa14.45□□□□□ -0.1
SMC4-222ENST00000490207 CFDP00746 253 aaPredicted RBP14.44□□□□□ -0.1
SMC4-222ENST00000490207 ZBTB8BQ8NAP8 495 aaPredicted RBP14.44□□□□□ -0.1
SMC4-222ENST00000490207 TRAV6A0A075B6T7 132 aa14.43□□□□□ -0.1
SMC4-222ENST00000490207 SMCO3A2RU48 225 aa14.43□□□□□ -0.1
SMC4-222ENST00000490207 TCRBP04435 133 aa14.43□□□□□ -0.1
SMC4-222ENST00000490207 C4BPBP20851 252 aa14.43□□□□□ -0.1
SMC4-222ENST00000490207 TMEM41BQ5BJD5 291 aa14.43□□□□□ -0.1
SMC4-222ENST00000490207 C1orf194Q5T5A4 169 aa14.43□□□□□ -0.1
SMC4-222ENST00000490207 BPIFCQ8NFQ6 507 aa14.43□□□□□ -0.1
SMC4-222ENST00000490207 SMIM8Q96KF7 97 aa14.43□□□□□ -0.1
SMC4-222ENST00000490207 RAB40CQ96S21 281 aa14.43□□□□□ -0.1
SMC4-222ENST00000490207 C11orf68Q9H3H3 251 aaKnown RBP14.43□□□□□ -0.1
SMC4-222ENST00000490207 NUPR2A6NF83 97 aa14.42□□□□□ -0.1
SMC4-222ENST00000490207 LINC00299Q6ZSB3 139 aa14.42□□□□□ -0.1
SMC4-222ENST00000490207 NUDT15Q9NV35 164 aa14.42□□□□□ -0.1
SMC4-222ENST00000490207 PMS2P5A8MQ11 134 aa14.41□□□□□ -0.1
SMC4-222ENST00000490207 CCSO14618 274 aa14.41□□□□□ -0.1
SMC4-222ENST00000490207 GIG44P09565 113 aaPredicted RBP14.41□□□□□ -0.1
SMC4-222ENST00000490207 TMEM144Q7Z5S9 345 aa14.41□□□□□ -0.1
SMC4-222ENST00000490207 S100ZQ8WXG8 99 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms