RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 A8MWV9 139 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 PROB1E7EW31 1015 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 SERF1AO75920 110 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 SPATA31B1PQ5VZV4 182 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 ORAOV1Q8WV07 137 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 NDUFA3O95167 84 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 FAM27E3Q08E93 113 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 ATOH7Q8N100 152 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 OR10W1Q8NGF6 305 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 GPHA2Q96T91 129 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 BTCP35070 178 aa7.35□□□□□ -1.23
LSAMP-205ENST00000490035 SRSF2Q01130 221 aaKnown RBP7.35□□□□□ -1.23
LSAMP-205ENST00000490035 ARFGEF3Q5TH69 2177 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 PRR32B1ATL7 298 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 NTN3O00634 580 aaPredicted RBP7.34□□□□□ -1.23
LSAMP-205ENST00000490035 TNFSF13O75888 250 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 ADMP35318 185 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 CRYGSP22914 178 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 RPUSD1Q9UJJ7 312 aaKnown RBP7.34□□□□□ -1.23
LSAMP-205ENST00000490035 APOMO95445 188 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 OTX1P32242 354 aaPredicted RBP7.34□□□□□ -1.23
LSAMP-205ENST00000490035 SRSF4Q08170 494 aaKnown RBP7.34□□□□□ -1.23
LSAMP-205ENST00000490035 SIGMAR1Q99720 223 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 DYSFO75923 2080 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 TRAV8-2A0A0B4J237 113 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 VCYO14598 125 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 DMRTA1Q5VZB9 504 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 FAM216BQ8N7L0 139 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 ABHD17AQ96GS6 310 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 SPANXCQ9NY87 97 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 HIST1H2BKO60814 126 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 HIST1H2BJP06899 126 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 LYL1P12980 280 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 HIST1H2BOP23527 126 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 HIST1H2BBP33778 126 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 HIST1H2BDP58876 126 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 HIST1H2BCP62807 126 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 HIST2H2BEQ16778 126 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.34□□□□□ -1.23
LSAMP-205ENST00000490035 BOD1L2Q8IYS8 172 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 HIST1H2BHQ93079 126 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 HIST1H2BNQ99877 126 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 HIST1H2BMQ99879 126 aa7.34□□□□□ -1.23
LSAMP-205ENST00000490035 FAM231BA6NCW3 169 aa7.34□□□□□ -1.24
LSAMP-205ENST00000490035 NAPSAO96009 420 aa7.34□□□□□ -1.24
LSAMP-205ENST00000490035 C9orf106Q8NAJ2 232 aa7.34□□□□□ -1.24
LSAMP-205ENST00000490035 NCOR1P1Q9H4R4 102 aa7.34□□□□□ -1.24
LSAMP-205ENST00000490035 OBSL1O75147 1896 aa7.34□□□□□ -1.24
LSAMP-205ENST00000490035 LINC01560Q8TB33 94 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 METRNQ9UJH8 293 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 NCOR1O75376 2440 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 SHISA3A0PJX4 238 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 ADARB2-AS1A8MUL3 147 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 M0R2P5 195 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 LY6G6FQ5SQ64 297 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 ERG28Q9UKR5 140 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.33□□□□□ -1.24
LSAMP-205ENST00000490035 A0A1B0GWJ7 208 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 ZNF138P52744 262 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 RNASE7Q9H1E1 156 aaKnown RBP7.33□□□□□ -1.24
LSAMP-205ENST00000490035 RFNGQ9Y644 331 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 PCNX2A6NKB5 2137 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 IGKV1D-43A0A0B4J1Z2 117 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 DERL1Q9BUN8 251 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 RAMP3O60896 148 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 COL6A6A6NMZ7 2263 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 FLVCR1-AS1Q8TAF5 88 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 RAMP1O60894 148 aa7.33□□□□□ -1.24
LSAMP-205ENST00000490035 LDLRAD4O15165 306 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 NDUFB8O95169 186 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 CKS1BP61024 79 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 TMEM14EPQ6UXP3 125 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 GGTLC1Q9BX51 225 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 TRAV8-4A0A0B4J246 113 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 IGHV1-18A0A0C4DH31 117 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 GAGE13Q4V321 117 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 NDUFS8O00217 210 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 SNRPCP09234 159 aaKnown RBP7.32□□□□□ -1.24
LSAMP-205ENST00000490035 HAPLN4Q86UW8 402 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 EFNA4P52798 201 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 ZNF362Q5T0B9 420 aaPredicted RBP7.32□□□□□ -1.24
LSAMP-205ENST00000490035 C17orf82Q86X59 251 aaPredicted RBP7.32□□□□□ -1.24
LSAMP-205ENST00000490035 TRGV4A0A0C4DH28 118 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 LYPD3O95274 346 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 OCC1Q8TAD7 63 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 TGFAP01135 160 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 IGKV1-9A0A0C4DH69 117 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 LOC105371267A0A1B0GV96 52 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 IGKV3-20P01619 116 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 CD28P10747 220 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 RSPO4Q2I0M5 234 aaPredicted RBP7.32□□□□□ -1.24
LSAMP-205ENST00000490035 TREML4Q6UXN2 200 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 DPH3P1Q9H4G8 78 aa7.32□□□□□ -1.24
LSAMP-205ENST00000490035 SPRED2Q7Z698 418 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 LYZL4Q96KX0 146 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 IGHV2-26A0A0B4J1V2 119 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 TRAV41A0A0B4J266 112 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 TOMM40O96008 361 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 RPL36AP83881 106 aaKnown RBP7.31□□□□□ -1.24
LSAMP-205ENST00000490035 IL17RELQ6ZVW7 336 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms