RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 MYH3P11055 1940 aa0.74□□□□□ -2.29
CD46-215ENST00000488596 MYH2Q9UKX2 1941 aa0.74□□□□□ -2.29
CD46-215ENST00000488596 CACNA1BQ00975 2339 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 UBR2Q8IWV8 1755 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 EIF3AQ14152 1382 aaKnown RBP0.73□□□□□ -2.29
CD46-215ENST00000488596 A0A087X0T9 212 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 IGKV1-9A0A0C4DH69 117 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 FAM159BA6NKW6 160 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 OR7C1O76099 320 aaPredicted RBP0.73□□□□□ -2.29
CD46-215ENST00000488596 CYBAP13498 195 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 SRIP30626 198 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 RHOBP62745 196 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 BRMS1LQ5PSV4 323 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 HACD4Q5VWC8 232 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 LCA10Q71F78 164 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 OR52L1Q8NGH7 329 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 OR10J5Q8NHC4 309 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 SFT2D1Q8WV19 159 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 HIST1H2BLQ99880 126 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 OPTCQ9UBM4 332 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 SLC35A3Q9Y2D2 325 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 NUP210LQ5VU65 1888 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 RP1P56715 2156 aa0.73□□□□□ -2.29
CD46-215ENST00000488596 DENND4CQ5VZ89 1909 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 LOC110117498A0A087WWA1 95 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 TRAV12-1A0A0B4J245 112 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 CLDN25C9JDP6 229 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 E5RI56 91 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 SERPINE1P05121 402 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 C8GP07360 202 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 PPIBP23284 216 aaKnown RBP0.72□□□□□ -2.29
CD46-215ENST00000488596 SERPINB9P50453 376 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 RPL19P84098 196 aaKnown RBP0.72□□□□□ -2.29
CD46-215ENST00000488596 TSNQ15631 228 aaKnown RBP0.72□□□□□ -2.29
CD46-215ENST00000488596 DHRS4L2Q6PKH6 230 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 LINC00301Q8NCQ3 95 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 OR8D4Q8NGM9 314 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 ZNF418Q8TF45 676 aaPredicted RBP0.72□□□□□ -2.29
CD46-215ENST00000488596 AP3S1Q92572 193 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 MRPL57Q9BQC6 102 aaKnown RBP0.72□□□□□ -2.29
CD46-215ENST00000488596 C9orf16Q9BUW7 83 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 ARMC1Q9NVT9 282 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 EPDR1Q9UM22 224 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 UTP11Q9Y3A2 253 aaKnown RBP0.72□□□□□ -2.29
CD46-215ENST00000488596 KMT2BQ9UMN6 2715 aaPredicted RBP0.72□□□□□ -2.29
CD46-215ENST00000488596 MIA2Q96PC5 1412 aa0.72□□□□□ -2.29
CD46-215ENST00000488596 RIMBP3CA6NJZ7 1639 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 RIMBP3BA6NNM3 1639 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 OBSL1O75147 1896 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 RIMBP3Q9UFD9 1639 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 ROS1P08922 2347 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 DOCK4Q8N1I0 1966 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 CCDC160A6NGH7 325 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 HMGB3O15347 200 aaKnown RBP0.71□□□□□ -2.3
CD46-215ENST00000488596 CYB5BO43169 146 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 ATG12O94817 140 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 PROSCO94903 275 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 ERP29P30040 261 aaKnown RBP0.71□□□□□ -2.3
CD46-215ENST00000488596 GNG10P50151 68 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 CNBPP62633 177 aaKnown RBP0.71□□□□□ -2.3
CD46-215ENST00000488596 KRR1Q13601 381 aaKnown RBP0.71□□□□□ -2.3
CD46-215ENST00000488596 ESRGQ1W209 222 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 GOLT1AQ6ZVE7 132 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 TMED4Q7Z7H5 227 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 LYG2Q86SG7 212 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 STX12Q86Y82 276 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 CLECL1Q8IZS7 167 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 Q8N814 137 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 GNPDA2Q8TDQ7 276 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 C2orf50Q96LR7 162 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 HS3ST2Q9Y278 367 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 ALPK2Q86TB3 2170 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 PBRM1Q86U86 1689 aa0.71□□□□□ -2.3
CD46-215ENST00000488596 DIDO1Q9BTC0 2240 aaKnown RBP0.7□□□□□ -2.3
CD46-215ENST00000488596 ROCK1Q13464 1354 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 SYNMO15061 1565 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 MCM3APO60318 1980 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 ARHGEF28Q8N1W1 1705 aaKnown RBP0.7□□□□□ -2.3
CD46-215ENST00000488596 E9PCH4 1651 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 TRAV4A0A0B4J268 109 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 TMEM238C9JI98 176 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 J3QRK9 145 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 G0S2P27469 103 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 HSPE1P61604 102 aaKnown RBP0.7□□□□□ -2.3
CD46-215ENST00000488596 POU6F1Q14863 301 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 C1orf137Q5JT78 98 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 Q6Q795 121 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 C3orf56Q8N813 242 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 OR11H6Q8NGC7 330 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 OR2T10Q8NGZ9 312 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 FAM172AQ8WUF8 416 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 SLAMF6Q96DU3 332 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 PRRT1Q99946 306 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 HOPXQ9BPY8 73 aaPredicted RBP0.7□□□□□ -2.3
CD46-215ENST00000488596 GINS3Q9BRX5 216 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 C6orf62Q9GZU0 229 aaPredicted RBP0.7□□□□□ -2.3
CD46-215ENST00000488596 PARVBQ9HBI1 364 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 CDC42SE1Q9NRR8 79 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 ACER3Q9NUN7 267 aa0.7□□□□□ -2.3
CD46-215ENST00000488596 GID8Q9NWU2 228 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms