RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 NXF2Q9GZY0 626 aaKnown RBP4.35□□□□□ -1.71
CDHR3-213ENST00000488386 TMEM222Q9H0R3 208 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 FAM212BQ9NTI7 297 aaPredicted RBP4.35□□□□□ -1.71
CDHR3-213ENST00000488386 MCUBQ9NWR8 336 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 CCDC59Q9P031 241 aaKnown RBP4.35□□□□□ -1.71
CDHR3-213ENST00000488386 CACNG5Q9UF02 275 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 GPR132Q9UNW8 380 aa4.35□□□□□ -1.71
CDHR3-213ENST00000488386 C14orf166Q9Y224 244 aaKnown RBP4.35□□□□□ -1.71
CDHR3-213ENST00000488386 PUS1Q9Y606 427 aaKnown RBP eCLIP4.35□□□□□ -1.71
CDHR3-213ENST00000488386 TRAV14DV4A0A0A6YYC5 116 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 TRAV25A0A0B4J276 109 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 ANKRD20A5PA0PJZ0 165 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 FABP12A6NFH5 140 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 CRYM-AS1A6NIL9 109 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 C15orf62A8K5M9 175 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 CEBPZOSA8MTT3 80 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 K7EMT4 169 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 DEFB4AO15263 64 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 NOL3O60936 208 aaKnown RBP4.34□□□□□ -1.71
CDHR3-213ENST00000488386 CDS2O95674 445 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 TMEM50AO95807 157 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 AKR1C4P17516 323 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 TBPP20226 339 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 SNCAP37840 140 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 RPL5P46777 297 aaKnown RBP4.34□□□□□ -1.71
CDHR3-213ENST00000488386 TMBIM6P55061 237 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 RELQ04864 619 aaPredicted RBP4.34□□□□□ -1.71
CDHR3-213ENST00000488386 TMEM187Q14656 261 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 LAMTOR1Q6IAA8 161 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 FAM219AQ8IW50 185 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 CADM3Q8N126 398 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 DUSP18Q8NEJ0 188 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 MCFD2Q8NI22 146 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 RRNAD1Q96FB5 475 aaKnown RBP4.34□□□□□ -1.71
CDHR3-213ENST00000488386 OR10C1Q96KK4 312 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 CTDSP1Q9GZU7 261 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 ENY2Q9NPA8 101 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 BIRC6Q9NR09 4857 aa4.34□□□□□ -1.71
CDHR3-213ENST00000488386 ALMS1Q8TCU4 4167 aa4.34□□□□□ -1.72
CDHR3-213ENST00000488386 AGRNO00468 2067 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 OR4C46A6NHA9 309 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 CTDSPLO15194 276 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 GSTZ1O43708 216 aaPredicted RBP4.33□□□□□ -1.72
CDHR3-213ENST00000488386 CLN5O75503 358 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 NPBWR1P48145 328 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 RND2P52198 227 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 DEFB131AP59861 70 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 SUPT4H1P63272 117 aaKnown RBP4.33□□□□□ -1.72
CDHR3-213ENST00000488386 MRPS10P82664 201 aaKnown RBP4.33□□□□□ -1.72
CDHR3-213ENST00000488386 ZNF79Q15937 498 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 ANKRD55Q3KP44 614 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 PYDC2Q56P42 97 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 ZNF600Q6ZNG1 722 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 LYZL2Q7Z4W2 148 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 TMED4Q7Z7H5 227 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 LYG2Q86SG7 212 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 RBPMSQ93062 196 aaKnown RBP4.33□□□□□ -1.72
CDHR3-213ENST00000488386 TXN2Q99757 166 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 SOSTQ9BQB4 213 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 MS4A6AQ9H2W1 248 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 RABAC1Q9UI14 185 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 V9GYH0 126 aa4.33□□□□□ -1.72
CDHR3-213ENST00000488386 LINC00854A0A1B0GVQ3 168 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 KNCNA6PVL3 124 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 INS-IGF2F8WCM5 200 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 DNASE2O00115 360 aaPredicted RBP4.32□□□□□ -1.72
CDHR3-213ENST00000488386 ATG12O94817 140 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 IGKV1-17P01599 117 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 IAPPP10997 89 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 SUB1P53999 127 aaKnown RBP eCLIP4.32□□□□□ -1.72
CDHR3-213ENST00000488386 APOC4P55056 127 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 DEFB1P60022 68 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 SPCS3P61009 180 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 DHODHQ02127 395 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 SSBP1Q04837 148 aaKnown RBP4.32□□□□□ -1.72
CDHR3-213ENST00000488386 TWIST1Q15672 202 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 USF2Q15853 346 aaPredicted RBP4.32□□□□□ -1.72
CDHR3-213ENST00000488386 BSXQ3C1V8 233 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 PVRIGQ6DKI7 326 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 PRSS54Q6PEW0 395 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 SLC24A4Q8NFF2 622 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 STXBP6Q8NFX7 210 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 OR4X1Q8NH49 305 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 C15orf40Q8WUR7 153 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 ACY3Q96HD9 319 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 PRRT1Q99946 306 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 GINS3Q9BRX5 216 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 RBKSQ9H477 322 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 VSIRQ9H7M9 311 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.32□□□□□ -1.72
CDHR3-213ENST00000488386 TMEM56-RWDD3S4R434 201 aa4.32□□□□□ -1.72
CDHR3-213ENST00000488386 CA1P00915 261 aaPredicted RBP4.31□□□□□ -1.72
CDHR3-213ENST00000488386 IFNA10P01566 189 aa4.31□□□□□ -1.72
CDHR3-213ENST00000488386 IL4P05112 153 aa4.31□□□□□ -1.72
CDHR3-213ENST00000488386 ZNF688P0C7X2 276 aa4.31□□□□□ -1.72
CDHR3-213ENST00000488386 IGLC1P0CG04 106 aa4.31□□□□□ -1.72
CDHR3-213ENST00000488386 SULT1A3P0DMM9 295 aa4.31□□□□□ -1.72
CDHR3-213ENST00000488386 SULT1A4P0DMN0 295 aa4.31□□□□□ -1.72
CDHR3-213ENST00000488386 NPY1RP25929 384 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms