RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 MED12Q93074 2177 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 TRAV34A0A0B4J273 112 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 K7EN84 100 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 HSBP1O75506 76 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 IGLV1-47P01700 117 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 RPL7P18124 248 aaKnown RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 DDTP30046 118 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 FCGR2BP31994 310 aaPredicted RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 CDKN1AP38936 164 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 MFAP2P55001 183 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 RPS20P60866 119 aaKnown RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 GNG5P63218 68 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 SSBP2P81877 361 aaPredicted RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 C5orf64Q2M2E5 130 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 COA6Q5JTJ3 125 aaKnown RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 RNASEKQ6P5S7 137 aaKnown RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 FXYD5Q96DB9 178 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 RNF125Q96EQ8 232 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 IGF2BP2-AS1Q96M15 143 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 GFRA4Q9GZZ7 299 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 C21orf62Q9NYP8 219 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 TRIOBPQ9H2D6 2365 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 PTPRBP23467 1997 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 KMT2BQ9UMN6 2715 aaPredicted RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 GRIFINA4D1Z8 144 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 TMEM8BA6NDV4 472 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 M0R2Z0 102 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 TCRAP04437 139 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 CRYGBP07316 175 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 PSG1P11464 419 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 NTF3P20783 257 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 SRIP30626 198 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 AMTP48728 403 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 PLP1P60201 277 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 Q0VG73 95 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 KLRD1Q13241 179 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 PYY3Q5JQD4 70 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 C9orf152Q5JTZ5 239 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 Q6AWC8 147 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 UNQ5815/PRO19632Q6UWF5 114 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 ZNF841Q6ZN19 808 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 ZNF705AQ6ZN79 300 aaPredicted RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 C19orf35Q6ZS72 473 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 SMIM15Q7Z3B0 74 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 KLHDC1Q8N7A1 406 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 LY6G5BQ8NDX9 201 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 NUDT10Q8NFP7 164 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 EEF1AKMT3Q96AZ1 226 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 NUDT11Q96G61 164 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 CCL19Q99731 98 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 SHANK2-AS3Q9BTD1 123 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 TMUB1Q9BVT8 246 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 FNDC4Q9H6D8 234 aaPredicted RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 ZFP30Q9Y2G7 519 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 CEP290O15078 2479 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 IGHV2-70DA0A0C4DH43 119 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 LINC00587B1AMM8 73 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 CRYGCP07315 174 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 GRNP28799 593 aaKnown RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 CAMPP49913 170 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 SLC35B1P78383 322 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 RELQ04864 619 aaPredicted RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 ECSCRQ19T08 205 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 LBHQ53QV2 105 aaPredicted RBP2.12□□□□□ -2.07
C9orf72-205ENST00000488117 CT83Q5H943 113 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 SAPCD1Q5SSQ6 148 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 ZNF600Q6ZNG1 722 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 GOLT1AQ6ZVE7 132 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 REC114Q7Z4M0 266 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 TMEM75Q8N9X5 138 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 OR2D3Q8NGH3 330 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 TBX15Q96SF7 602 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 HSPB9Q9BQS6 159 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 TPPP3Q9BW30 176 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 FBXL7Q9UJT9 491 aa2.12□□□□□ -2.07
C9orf72-205ENST00000488117 RAI1Q7Z5J4 1906 aaPredicted RBP2.11□□□□□ -2.07
C9orf72-205ENST00000488117 IGKV1OR2-108A0A075B7D4 117 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 TMEM189A5PLL7 270 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 TEX22C9J3V5 150 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 H3BRN7 92 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 M0QZK8 103 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 SIAH2O43255 324 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 SERF1AO75920 110 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 OR2J3O76001 311 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 HOXB4P17483 251 aaPredicted RBP2.11□□□□□ -2.07
C9orf72-205ENST00000488117 BMI1P35226 326 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 UBE2E1P51965 193 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 PRB3Q04118 309 aaPredicted RBP2.11□□□□□ -2.07
C9orf72-205ENST00000488117 ATP5G2Q06055 141 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 CLEC2AQ6UVW9 174 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 UNQ6494/PRO21346Q6UXR6 183 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 ZNF562Q6V9R5 426 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 RBPMS2Q6ZRY4 209 aaKnown RBP2.11□□□□□ -2.07
C9orf72-205ENST00000488117 DTX2Q86UW9 622 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 CIARTQ8N365 385 aaPredicted RBP2.11□□□□□ -2.07
C9orf72-205ENST00000488117 TTC9CQ8N5M4 171 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 WIPF2Q8TF74 440 aaPredicted RBP2.11□□□□□ -2.07
C9orf72-205ENST00000488117 C1orf159Q96HA4 380 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 RITA1Q96K30 269 aa2.11□□□□□ -2.07
C9orf72-205ENST00000488117 FAM167A-AS1Q96KT0 104 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms