RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.37□□□□□ -2.35
CCDC66-221ENST00000487739 UQCC1Q9NVA1 299 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 NHP2Q9NX24 153 aaKnown RBP0.37□□□□□ -2.35
CCDC66-221ENST00000487739 PRELID3BQ9Y3B1 194 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 PIK3C2GO75747 1445 aa0.37□□□□□ -2.35
CCDC66-221ENST00000487739 PHRF1Q9P1Y6 1649 aaKnown RBP0.36□□□□□ -2.35
CCDC66-221ENST00000487739 C7orf71A4D174 169 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 CCL25O15444 150 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 GADD45GO95257 159 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 SERPINE1P05121 402 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 LSM6P62312 80 aaKnown RBP0.36□□□□□ -2.35
CCDC66-221ENST00000487739 IAH1Q2TAA2 248 aaPredicted RBP0.36□□□□□ -2.35
CCDC66-221ENST00000487739 OR8J2Q8NGG1 315 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 OR2T10Q8NGZ9 312 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 BORCS7Q96B45 105 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 SLAMF6Q96DU3 332 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 BCL2L10Q9HD36 194 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 CITO14578 2027 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 ZFYVE9O95405 1425 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 MYO3BQ8WXR4 1341 aa0.36□□□□□ -2.35
CCDC66-221ENST00000487739 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 CYB5BO43169 146 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 KLF7O75840 302 aaPredicted RBP0.35□□□□□ -2.35
CCDC66-221ENST00000487739 RPP14O95059 124 aaKnown RBP0.35□□□□□ -2.35
CCDC66-221ENST00000487739 TCRBP04435 133 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 PPIBP23284 216 aaKnown RBP0.35□□□□□ -2.35
CCDC66-221ENST00000487739 EFNA4P52798 201 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 Q6Q795 121 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 Q8IYB0 196 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 OR6V1Q8N148 313 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 PATE1Q8WXA2 126 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 C2orf50Q96LR7 162 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 TMEM70Q9BUB7 260 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 TAS2R7Q9NYW3 318 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 IDI2-AS1Q9NZ38 188 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 FBXO5Q9UKT4 447 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 NOSIPQ9Y314 301 aaKnown RBP0.35□□□□□ -2.35
CCDC66-221ENST00000487739 CCDC144AA2RUR9 1427 aa0.35□□□□□ -2.35
CCDC66-221ENST00000487739 MYO5AQ9Y4I1 1855 aaKnown RBP0.35□□□□□ -2.35
CCDC66-221ENST00000487739 PTPRFP10586 1907 aa0.34□□□□□ -2.35
CCDC66-221ENST00000487739 CCL16O15467 120 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 PDE6DO43924 150 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 C8GP07360 202 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 RNASE4P34096 147 aaKnown RBP0.34□□□□□ -2.36
CCDC66-221ENST00000487739 ANP32AP39687 249 aaKnown RBP0.34□□□□□ -2.36
CCDC66-221ENST00000487739 DYNLT1P63172 113 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 PSG9Q00887 426 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 EDDM3AQ14507 147 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 FAM74A1Q5RGS3 127 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 OTUD6BQ8N6M0 293 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 SLC30A7Q8NEW0 376 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 OR51A2Q8NGJ7 313 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 STAG3L4Q8TBR4 150 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 TEX47Q8TBZ9 253 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 C4orf3Q8WVX3 66 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 PRADC1Q9BSG0 188 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 TRIM4Q9C037 500 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 C14orf132Q9NPU4 83 aa0.34□□□□□ -2.36
CCDC66-221ENST00000487739 CHCHD2Q9Y6H1 151 aaPredicted RBP0.34□□□□□ -2.36
CCDC66-221ENST00000487739 NUP210LQ5VU65 1888 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 MYO18AQ92614 2054 aaKnown RBP0.33□□□□□ -2.36
CCDC66-221ENST00000487739 TRBV6-4A0A1B0GX49 114 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 TIMM17BO60830 172 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 SERPINB9P50453 376 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 CEBPGP53567 150 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 GKN2Q86XP6 184 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 OR52L1Q8NGH7 329 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 OR2T35Q8NGX2 323 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 TMEM254Q8TBM7 123 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 FAM172AQ8WUF8 416 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 PPP1R14BQ96C90 147 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 TLNRD1Q9H1K6 362 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 TVP23BQ9NYZ1 205 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 GLTPQ9NZD2 209 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 PLB1Q6P1J6 1458 aa0.33□□□□□ -2.36
CCDC66-221ENST00000487739 RTL1A6NKG5 1358 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 NCOA1Q15788 1441 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 FANCMQ8IYD8 2048 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 TCRBV4S1A1TA0A5B7 111 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 DHFRP00374 187 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 CD2P06729 351 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 AP3S2P59780 193 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 MYL6P60660 151 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 EIF5AP63241 154 aaKnown RBP0.32□□□□□ -2.36
CCDC66-221ENST00000487739 SRSF6Q13247 344 aaKnown RBP0.32□□□□□ -2.36
CCDC66-221ENST00000487739 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 TMEM97Q5BJF2 176 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 LINC00322Q6ZN03 302 aaPredicted RBP0.32□□□□□ -2.36
CCDC66-221ENST00000487739 ST6GALNAC3Q8NDV1 305 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 TMEM133Q9H2Q1 129 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 PARVGQ9HBI0 331 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 TMEM14CQ9P0S9 112 aa0.32□□□□□ -2.36
CCDC66-221ENST00000487739 NUP98P52948 1817 aa0.31□□□□□ -2.36
CCDC66-221ENST00000487739 MYLKQ15746 1914 aa0.31□□□□□ -2.36
CCDC66-221ENST00000487739 TLCD2A6NGC4 264 aa0.31□□□□□ -2.36
CCDC66-221ENST00000487739 OR2T8A6NH00 312 aa0.31□□□□□ -2.36
CCDC66-221ENST00000487739 SRP14P37108 136 aaKnown RBP0.31□□□□□ -2.36
CCDC66-221ENST00000487739 PIGPP57054 158 aa0.31□□□□□ -2.36
CCDC66-221ENST00000487739 HIST1H3AP68431 136 aa0.31□□□□□ -2.36
CCDC66-221ENST00000487739 H3F3AP84243 136 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 254.5 ms