RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 CELA3AP09093 270 aa12.55□□□□□ -0.4
HLA-DQB1-209ENST00000487676 NGBQ9NPG2 151 aa12.55□□□□□ -0.4
HLA-DQB1-209ENST00000487676 AZU1P20160 251 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 TSSC4Q9Y5U2 329 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 PMS2P5A8MQ11 134 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 PEAR1Q5VY43 1037 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 ZNF502Q8TBZ5 544 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 GFRA4Q9GZZ7 299 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 TP53TG3Q9ULZ0 132 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 CELA3BP08861 270 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 FRMD6-AS1P0C7T7 363 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 IGLC1P0CG04 106 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 CT83Q5H943 113 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 PPP1R32Q7Z5V6 425 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 ZNF329Q86UD4 541 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 FAM90A1Q86YD7 464 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 ZNF295-AS1Q8N0V1 137 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 HES7Q9BYE0 225 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 A0A1W2PPM0 123 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 ZNF418Q8TF45 676 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 ANAPC13Q9BS18 74 aa12.54□□□□□ -0.4
HLA-DQB1-209ENST00000487676 SMRP1Q8NCR6 262 aa12.53□□□□□ -0.4
HLA-DQB1-209ENST00000487676 INSIG2Q9Y5U4 225 aa12.53□□□□□ -0.4
HLA-DQB1-209ENST00000487676 DPM2O94777 84 aa12.53□□□□□ -0.4
HLA-DQB1-209ENST00000487676 CD300EQ496F6 205 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB1-209ENST00000487676 DTX1Q86Y01 620 aa12.53□□□□□ -0.4
HLA-DQB1-209ENST00000487676 PI4KAP42356 2102 aa12.53□□□□□ -0.4
HLA-DQB1-209ENST00000487676 TMPRSS3P57727 454 aa12.53□□□□□ -0.4
HLA-DQB1-209ENST00000487676 PSMB11A5LHX3 300 aa12.52□□□□□ -0.4
HLA-DQB1-209ENST00000487676 TCRAP04437 139 aa12.52□□□□□ -0.4
HLA-DQB1-209ENST00000487676 SCGB1A1P11684 91 aa12.52□□□□□ -0.4
HLA-DQB1-209ENST00000487676 B3GALT5-AS1P59052 145 aa12.52□□□□□ -0.41
HLA-DQB1-209ENST00000487676 RHOGP84095 191 aa12.52□□□□□ -0.41
HLA-DQB1-209ENST00000487676 SPANXN1Q5VSR9 72 aa12.52□□□□□ -0.41
HLA-DQB1-209ENST00000487676 LGALS7P47929 136 aa12.52□□□□□ -0.41
HLA-DQB1-209ENST00000487676 FCGR2BP31994 310 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB1-209ENST00000487676 CCL17Q92583 94 aa12.52□□□□□ -0.41
HLA-DQB1-209ENST00000487676 OBSL1O75147 1896 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 GAGE12HA6NDE8 117 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 SNCGO76070 127 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 LEPP41159 167 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 PRR20EP86478 221 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 PRR20CP86479 221 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 PRR20DP86480 221 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 PRR20BP86481 221 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 PRR20AP86496 221 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 A0A1W2PRD5 423 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 A0A1W2PRF3 423 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 A0A1W2PRM7 423 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 IGKCP01834 107 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 TEX29Q8N6K0 151 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 TEX45Q8NA69 505 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 PILRBQ9UKJ0 227 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 COL4A6Q14031 1691 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 FAM168AQ92567 244 aa12.51□□□□□ -0.41
HLA-DQB1-209ENST00000487676 IGHV3-72A0A0B4J1Y9 119 aa12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 ZNF492Q9P255 531 aa12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 SMPXQ9UHP9 88 aa12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 PCNX3Q9H6A9 2034 aa12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 D6R8Y8 96 aa12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 LINC01559Q495D7 138 aa12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 NXT2Q9NPJ8 142 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 PSG8Q9UQ74 426 aa12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 LSM4Q9Y4Z0 139 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 MYOD1P15172 320 aa12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 DLX1P56177 255 aa12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 Q6ZPA2 131 aa12.5□□□□□ -0.41
HLA-DQB1-209ENST00000487676 TRIOBPQ9H2D6 2365 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 RAB9AP51151 201 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 FAM169BQ8N8A8 192 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 OR4A5Q8NH83 315 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 TMEM262E9PQX1 116 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 CD24P25063 80 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 CD40P25942 277 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 SAP25Q8TEE9 199 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 PRDM6Q9NQX0 595 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 FER1L5A0AVI2 2057 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 TRAV17A0A0B4J275 112 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 TM4SF5O14894 197 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 FAM53AQ6NSI3 398 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 Q6ZT83 130 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 RNF138Q8WVD3 245 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 MRPL20Q9BYC9 149 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 GEMIN7Q9H840 131 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 MLANAQ16655 118 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 CHAC1Q9BUX1 264 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 SLC25A2Q9BXI2 301 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 SCRT2Q9NQ03 307 aa12.49□□□□□ -0.41
HLA-DQB1-209ENST00000487676 C21orf140B9A014 251 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 F8W1H4 67 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 COX7A1P24310 79 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 ETDBQ3ZM63 59 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 MRAP2Q96G30 205 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 TMEM14BQ9NUH8 114 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 SPTBN2O15020 2390 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 ZNF318Q5VUA4 2279 aa12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 HOXA3O43365 443 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB1-209ENST00000487676 RNASE2P10153 161 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 253.4 ms