RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 MOSP00540 346 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 FCGR2BP31994 310 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-209ENST00000487188 BCL6BQ8N143 479 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-209ENST00000487188 STXBP6Q8NFX7 210 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 Q8TCH9 128 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 WFDC12Q8WWY7 111 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 SRSF12Q8WXF0 261 aaKnown RBP5.08□□□□□ -1.6
VPS13D-209ENST00000487188 ZNF747Q9BV97 191 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 KLF13Q9Y2Y9 288 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-209ENST00000487188 FNDC10F2Z333 226 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 ACP1P24666 158 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 MC5RP33032 325 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 SUB1P53999 127 aaKnown RBP eCLIP5.08□□□□□ -1.61e-6■■□□□ 12.7
VPS13D-209ENST00000487188 MLANAQ16655 118 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 MRPL14Q6P1L8 145 aaKnown RBP5.08□□□□□ -1.6
VPS13D-209ENST00000487188 MRAP2Q96G30 205 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 IMMP1LQ96LU5 166 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 NDFIP1Q9BT67 221 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 TNRC6AQ8NDV7 1962 aaKnown RBP5.08□□□□□ -1.6
VPS13D-209ENST00000487188 PI4KAP42356 2102 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 C2CD4DB7Z1M9 353 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 PRDX2P32119 198 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 CD69Q07108 199 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 LINC00305Q7Z4B0 112 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 WFDC3Q8IUB2 231 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 NPIPB3Q92617 1050 aa5.08□□□□□ -1.6
VPS13D-209ENST00000487188 A0A1B0GWB2 263 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 NCR2O95944 276 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 CT45A10P0DMU9 189 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 CRYBA4P53673 196 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 PRCDQ00LT1 54 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 ETDBQ3ZM63 59 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 ZNF766Q5HY98 468 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 PPP1R32Q7Z5V6 425 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 RPRMLQ8N4K4 120 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 FMC1Q96HJ9 113 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 C22orf46C9J442 243 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 K7ERJ3 54 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 PRSS1P07477 247 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 MORN5Q5VZ52 161 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 OR5AN1Q8NGI8 311 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 C1orf159Q96HA4 380 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 ZNF479Q96JC4 524 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 VGLL1Q99990 258 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 WDFY4Q6ZS81 3184 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 TNCP24821 2201 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 IGHV3OR15-7A0A075B7D8 119 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 IGKV3D-15A0A087WSY6 115 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 FXYD7P58549 80 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 MZT1Q08AG7 82 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 CT83Q5H943 113 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 C18orf15Q96N68 181 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 DUSP23Q9BVJ7 150 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 TMEM14BQ9NUH8 114 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 CALYQ9NYX4 217 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 USP34Q70CQ2 3546 aa5.07□□□□□ -1.6
VPS13D-209ENST00000487188 A0A1W2PQM1 296 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 MGST3O14880 152 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 HBDP02042 147 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 MPV17P39210 176 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 SPINK14Q6IE38 97 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 PCP2Q8IVA1 136 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 BOD1L2Q8IYS8 172 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 ARPC1AQ92747 370 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 IFI27L1Q96BM0 104 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 PRELID3AQ96N28 172 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 ZNF714Q96N38 554 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 RALYQ9UKM9 306 aaKnown RBP5.06□□□□□ -1.6
VPS13D-209ENST00000487188 MYO15AQ9UKN7 3530 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 BDP1A6H8Y1 2624 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 IGKV1OR2-108A0A075B7D4 117 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 TMSB15BA0A087X1C1 80 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 UPK2O00526 184 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 KLK10O43240 276 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 SS18L1O75177 396 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-209ENST00000487188 CELA3AP09093 270 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 SAA2P0DJI9 122 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-209ENST00000487188 IFI27P40305 119 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-209ENST00000487188 LGALS9BQ3B8N2 356 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 C2orf83Q53S99 150 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 LGALS9CQ6DKI2 356 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 GOLT1AQ6ZVE7 132 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 SMRP1Q8NCR6 262 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 OR1L8Q8NGR8 309 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 GTSF1Q8WW33 167 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 RND1Q92730 232 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 HARBI1Q96MB7 349 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 ZNF492Q9P255 531 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 SPAARA0A1B0GVQ0 90 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 SIVA1O15304 175 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 LYZL6O75951 148 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 ATP5IP56385 69 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-209ENST00000487188 FOXE3Q13461 319 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 GAGE13Q4V321 117 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 INO80CQ6PI98 192 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-209ENST00000487188 KLF14Q8TD94 323 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-209ENST00000487188 DPF1Q92782 380 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 FAM167A-AS1Q96KT0 104 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 CHAC1Q9BUX1 264 aa5.06□□□□□ -1.6
VPS13D-209ENST00000487188 GFRA4Q9GZZ7 299 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms