RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TLNRD1Q9H1K6 362 aa0.61□□□□□ -2.31
LTN1-206ENST00000486427 C14orf132Q9NPU4 83 aa0.61□□□□□ -2.31
LTN1-206ENST00000486427 CDC42SE1Q9NRR8 79 aa0.61□□□□□ -2.31
LTN1-206ENST00000486427 TVP23BQ9NYZ1 205 aa0.61□□□□□ -2.31
LTN1-206ENST00000486427 SLC22A13Q9Y226 551 aa0.61□□□□□ -2.31
LTN1-206ENST00000486427 MYO3BQ8WXR4 1341 aa0.61□□□□□ -2.31
LTN1-206ENST00000486427 ARHGEF28Q8N1W1 1705 aaKnown RBP0.61□□□□□ -2.31
LTN1-206ENST00000486427 RIMBP3CA6NJZ7 1639 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 RIMBP3BA6NNM3 1639 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 RIMBP3Q9UFD9 1639 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 TAF1LQ8IZX4 1826 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 CCDC160A6NGH7 325 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 C1orf196B1AJZ1 125 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 J3QRK9 145 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 TEX261Q6UWH6 196 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 Q8N6K4 173 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 OR2T10Q8NGZ9 312 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 AMELYQ99218 206 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 BCL2L10Q9HD36 194 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 UTP11Q9Y3A2 253 aaKnown RBP0.6□□□□□ -2.31
LTN1-206ENST00000486427 U3KQ87 197 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 PEAK1Q9H792 1746 aa0.6□□□□□ -2.31
LTN1-206ENST00000486427 COL1A1P02452 1464 aaPredicted RBP0.6□□□□□ -2.31
LTN1-206ENST00000486427 TMEM114B3SHH9 223 aa0.59□□□□□ -2.31
LTN1-206ENST00000486427 CYB5BO43169 146 aa0.59□□□□□ -2.31
LTN1-206ENST00000486427 ZNF25P17030 456 aaPredicted RBP0.59□□□□□ -2.31
LTN1-206ENST00000486427 ANP32AP39687 249 aaKnown RBP0.59□□□□□ -2.31
LTN1-206ENST00000486427 KRTAP19-3Q7Z4W3 81 aa0.59□□□□□ -2.31
LTN1-206ENST00000486427 Q8IYB0 196 aa0.59□□□□□ -2.31
LTN1-206ENST00000486427 CLECL1Q8IZS7 167 aa0.59□□□□□ -2.31
LTN1-206ENST00000486427 FAM172AQ8WUF8 416 aa0.59□□□□□ -2.31
LTN1-206ENST00000486427 PATE1Q8WXA2 126 aa0.59□□□□□ -2.31
LTN1-206ENST00000486427 PPP1R14BQ96C90 147 aa0.59□□□□□ -2.31
LTN1-206ENST00000486427 SLAMF6Q96DU3 332 aa0.59□□□□□ -2.31
LTN1-206ENST00000486427 FBXO5Q9UKT4 447 aa0.59□□□□□ -2.31
LTN1-206ENST00000486427 CHCHD2Q9Y6H1 151 aaPredicted RBP0.59□□□□□ -2.31
LTN1-206ENST00000486427 E9PCH4 1651 aa0.59□□□□□ -2.32
LTN1-206ENST00000486427 DEFA3P59666 94 aa0.58□□□□□ -2.32
LTN1-206ENST00000486427 DYNLT1P63172 113 aa0.58□□□□□ -2.32
LTN1-206ENST00000486427 SPRNQ5BIV9 151 aa0.58□□□□□ -2.32
LTN1-206ENST00000486427 PRADC1Q9BSG0 188 aa0.58□□□□□ -2.32
LTN1-206ENST00000486427 C6orf62Q9GZU0 229 aaPredicted RBP0.58□□□□□ -2.32
LTN1-206ENST00000486427 UCK1Q9HA47 277 aa0.58□□□□□ -2.32
LTN1-206ENST00000486427 MDN1Q9NU22 5596 aa0.58□□□□□ -2.32
LTN1-206ENST00000486427 TRAV4A0A0B4J268 109 aa0.57□□□□□ -2.32
LTN1-206ENST00000486427 CLDN25C9JDP6 229 aa0.57□□□□□ -2.32
LTN1-206ENST00000486427 GADD45GO95257 159 aa0.57□□□□□ -2.32
LTN1-206ENST00000486427 DHFRP00374 187 aa0.57□□□□□ -2.32
LTN1-206ENST00000486427 ERVS71-1P61550 626 aa0.57□□□□□ -2.32
LTN1-206ENST00000486427 RHOBP62745 196 aa0.57□□□□□ -2.32
LTN1-206ENST00000486427 SLC30A7Q8NEW0 376 aa0.57□□□□□ -2.32
LTN1-206ENST00000486427 BORCS5Q969J3 196 aa0.57□□□□□ -2.32
LTN1-206ENST00000486427 TMEM126AQ9H061 195 aa0.57□□□□□ -2.32
LTN1-206ENST00000486427 PARVBQ9HBI1 364 aa0.57□□□□□ -2.32
LTN1-206ENST00000486427 FMN1Q68DA7 1419 aa0.56□□□□□ -2.32
LTN1-206ENST00000486427 TRBV6-4A0A1B0GX49 114 aa0.56□□□□□ -2.32
LTN1-206ENST00000486427 CCL25O15444 150 aa0.56□□□□□ -2.32
LTN1-206ENST00000486427 CCL16O15467 120 aa0.56□□□□□ -2.32
LTN1-206ENST00000486427 OR7C1O76099 320 aaPredicted RBP0.56□□□□□ -2.32
LTN1-206ENST00000486427 PIGPP57054 158 aa0.56□□□□□ -2.32
LTN1-206ENST00000486427 SIGMAR1Q99720 223 aa0.56□□□□□ -2.32
LTN1-206ENST00000486427 TMEM70Q9BUB7 260 aa0.56□□□□□ -2.32
LTN1-206ENST00000486427 SCN10AQ9Y5Y9 1956 aa0.56□□□□□ -2.32
LTN1-206ENST00000486427 SCN3AQ9NY46 2000 aa0.55□□□□□ -2.32
LTN1-206ENST00000486427 KIF1BO60333 1816 aa0.55□□□□□ -2.32
LTN1-206ENST00000486427 CTXN2P0C2S0 81 aa0.55□□□□□ -2.32
LTN1-206ENST00000486427 CYBAP13498 195 aa0.55□□□□□ -2.32
LTN1-206ENST00000486427 EIF5AP63241 154 aaKnown RBP0.55□□□□□ -2.32
LTN1-206ENST00000486427 LYRM7Q5U5X0 104 aa0.55□□□□□ -2.32
LTN1-206ENST00000486427 SBSPONQ8IVN8 264 aa0.55□□□□□ -2.32
LTN1-206ENST00000486427 OR11H6Q8NGC7 330 aa0.55□□□□□ -2.32
LTN1-206ENST00000486427 STAG3L4Q8TBR4 150 aa0.55□□□□□ -2.32
LTN1-206ENST00000486427 LINC00467Q9BRT7 94 aa0.55□□□□□ -2.32
LTN1-206ENST00000486427 DOCK3Q8IZD9 2030 aa0.55□□□□□ -2.32
LTN1-206ENST00000486427 TNS3Q68CZ2 1445 aa0.55□□□□□ -2.32
LTN1-206ENST00000486427 TRBV19A0A075B6N1 114 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 FAM159BA6NKW6 160 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 TIMM17BO60830 172 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 ERP29P30040 261 aaKnown RBP0.54□□□□□ -2.32
LTN1-206ENST00000486427 SRP14P37108 136 aaKnown RBP0.54□□□□□ -2.32
LTN1-206ENST00000486427 SERPINB9P50453 376 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 PSG9Q00887 426 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 KRR1Q13601 381 aaKnown RBP0.54□□□□□ -2.32
LTN1-206ENST00000486427 RRN3P1Q2M238 152 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 FAM74A1Q5RGS3 127 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 C22orf39Q6P5X5 142 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 PDZD9Q8IXQ8 264 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 TMEM254Q8TBM7 123 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 GNPDA2Q8TDQ7 276 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 GPER1Q99527 375 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 CNTRLQ7Z7A1 2325 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 OBSL1O75147 1896 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 KIAA1549Q9HCM3 1950 aa0.54□□□□□ -2.32
LTN1-206ENST00000486427 PCF11O94913 1555 aaKnown RBP0.53□□□□□ -2.32
LTN1-206ENST00000486427 TRGV10A0A0A0MS01 117 aa0.53□□□□□ -2.32
LTN1-206ENST00000486427 TCRBV4S1A1TA0A5B7 111 aa0.53□□□□□ -2.32
LTN1-206ENST00000486427 NCR3O14931 201 aa0.53□□□□□ -2.32
LTN1-206ENST00000486427 ATP5G3P48201 142 aa0.53□□□□□ -2.32
LTN1-206ENST00000486427 ROMO1P60602 79 aa0.53□□□□□ -2.32
LTN1-206ENST00000486427 LIN52Q52LA3 116 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms