RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 MFAP4P55083 255 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 KIAA0141Q14154 515 aaPredicted RBP9.43□□□□□ -0.9
PKP4-213ENST00000486254 FBLN7Q53RD9 439 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 RUSC1-AS1Q66K80 236 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 TEX38Q6PEX7 206 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 VN1R17PQ8TDU5 208 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 SRD5A3Q9H8P0 318 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 URGCP-MRPS24S4R325 110 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 ZNF462Q96JM2 2506 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 ZFYVE26Q68DK2 2539 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 FLNCQ14315 2725 aa9.42□□□□□ -0.9
PKP4-213ENST00000486254 TGIF2-C20orf24A0A0A6YYL0 155 aa9.42□□□□□ -0.9
PKP4-213ENST00000486254 TRAV20A0A0B4J274 112 aa9.42□□□□□ -0.9
PKP4-213ENST00000486254 HELTA6NFD8 242 aa9.42□□□□□ -0.9
PKP4-213ENST00000486254 UBE2CO00762 179 aa9.42□□□□□ -0.9
PKP4-213ENST00000486254 IGHV3-48P01763 117 aa9.42□□□□□ -0.9
PKP4-213ENST00000486254 S100A9P06702 114 aaKnown RBP9.42□□□□□ -0.9
PKP4-213ENST00000486254 MSMBP08118 114 aa9.42□□□□□ -0.9
PKP4-213ENST00000486254 RD3LP0DJH9 198 aa9.42□□□□□ -0.9
PKP4-213ENST00000486254 APELAP0DMC3 54 aa9.42□□□□□ -0.9
PKP4-213ENST00000486254 EGR2P11161 476 aaPredicted RBP9.42□□□□□ -0.9
PKP4-213ENST00000486254 FAM3BP58499 235 aaPredicted RBP9.42□□□□□ -0.9
PKP4-213ENST00000486254 C19orf35Q6ZS72 473 aa9.42□□□□□ -0.9
PKP4-213ENST00000486254 OR1B1Q8NGR6 318 aa9.42□□□□□ -0.9
PKP4-213ENST00000486254 GAR1Q9NY12 217 aaKnown RBP9.42□□□□□ -0.9
PKP4-213ENST00000486254 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.42□□□□□ -0.95e-6■■□□□ 13.7
PKP4-213ENST00000486254 IGHV4-30-2A0A087WSY4 118 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 WI2-2373I1.2A0A1W2PRP0 233 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 B4DSR2 109 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 S100A6P06703 90 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 ORM2P19652 201 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 CD24P25063 80 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 S100A7P31151 101 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 GNG4P50150 75 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 SUMO1P63165 101 aaKnown RBP9.41□□□□□ -0.9
PKP4-213ENST00000486254 OCC1Q8TAD7 63 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 SHANK2-AS3Q9BTD1 123 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 ELOVL1Q9BW60 279 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 MOB4Q9Y3A3 225 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 TRAV5A0A0B4J249 113 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 H3BRN7 92 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 BRI3O95415 125 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 CRYBB3P26998 211 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 CNN1P51911 297 aaKnown RBP9.41□□□□□ -0.9
PKP4-213ENST00000486254 TIGITQ495A1 244 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 ZNF329Q86UD4 541 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 C5orf56Q8N8D9 126 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 C5orf17Q8NAS9 161 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 OR10G8Q8NGN5 311 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 IGF2BP2-AS1Q96M15 143 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 SLC25A39Q9BZJ4 359 aaPredicted RBP9.41□□□□□ -0.9
PKP4-213ENST00000486254 OSTCQ9NRP0 149 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 C21orf62Q9NYP8 219 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 KLF12Q9Y4X4 402 aa9.41□□□□□ -0.9
PKP4-213ENST00000486254 UBR5O95071 2799 aaPredicted RBP9.4□□□□□ -0.9
PKP4-213ENST00000486254 SPG11Q96JI7 2443 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 TRBV9A0A0B4J1U6 114 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 PPP5D1E7EU14 171 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 F8W735 103 aaPredicted RBP9.4□□□□□ -0.9
PKP4-213ENST00000486254 M0QZK8 103 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 AP4M1O00189 453 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 ISLRO14498 428 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 PHOX2AO14813 284 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 GNG7O60262 68 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 GCGP01275 180 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 NBEAP1P0C6P0 100 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 PYYP10082 97 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 HIST1H1EP10412 219 aaKnown RBP9.4□□□□□ -0.9
PKP4-213ENST00000486254 SRSF1Q07955 248 aaKnown RBP eCLIP9.4□□□□□ -0.9
PKP4-213ENST00000486254 CENPWQ5EE01 88 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 LYPD1Q8N2G4 141 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 ZNF491Q8N8L2 437 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 RNF125Q96EQ8 232 aa9.4□□□□□ -0.9
PKP4-213ENST00000486254 FAM103A1Q9BTL3 118 aaKnown RBP9.4□□□□□ -0.9
PKP4-213ENST00000486254 A0A096LNT2 108 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 TRAV40A0A0B4J280 105 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 J3QLI3 93 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 PEX7O00628 323 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 PRB1P04280 392 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 S100A8P05109 93 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 LYZP61626 148 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 PDE6HQ13956 83 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 C19orf54Q5BKX5 351 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 FAM120AOSQ5T036 256 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 ZFP82Q8N141 532 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 ARL6IP6Q8N6S5 226 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 ZNF580Q9UK33 172 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 LRRK2Q5S007 2527 aa9.39□□□□□ -0.91
PKP4-213ENST00000486254 EPG5Q9HCE0 2579 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 IGHV3-21A0A0B4J1V1 117 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 TRBV6-1A0A0K0K1D8 114 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 K7EN84 100 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 TMEM183BQ1AE95 376 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 ZNF600Q6ZNG1 722 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 FAM231DQ6ZW35 169 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 BPIFA4PQ86YQ2 179 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 LRRC75A-AS1Q8N1F1 130 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 HSPB9Q9BQS6 159 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 ATG101Q9BSB4 218 aa9.38□□□□□ -0.91
PKP4-213ENST00000486254 SAV1Q9H4B6 383 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms