RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 TEX13DA0A0J9YY54 714 aaPredicted RBP9.88□□□□□ -0.83
SMARCD3-211ENST00000485592 RPS10-NUDT3A0A1W2PQS6 291 aa9.88□□□□□ -0.83
SMARCD3-211ENST00000485592 B3GALNT1O75752 331 aa9.88□□□□□ -0.83
SMARCD3-211ENST00000485592 HNRNPCP07910 306 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMARCD3-211ENST00000485592 CCR6P51684 374 aa9.88□□□□□ -0.83
SMARCD3-211ENST00000485592 SNRPD3P62318 126 aaKnown RBP9.88□□□□□ -0.83
SMARCD3-211ENST00000485592 LGALS9BQ3B8N2 356 aa9.88□□□□□ -0.83
SMARCD3-211ENST00000485592 UBE2DNLQ8IWF7 75 aa9.88□□□□□ -0.83
SMARCD3-211ENST00000485592 FNDC4Q9H6D8 234 aaPredicted RBP9.88□□□□□ -0.83
SMARCD3-211ENST00000485592 BATF3Q9NR55 127 aa9.88□□□□□ -0.83
SMARCD3-211ENST00000485592 MRPL36Q9P0J6 103 aaKnown RBP9.88□□□□□ -0.83
SMARCD3-211ENST00000485592 PLA2G10O15496 165 aa9.87□□□□□ -0.83
SMARCD3-211ENST00000485592 IFNA10P01566 189 aa9.87□□□□□ -0.83
SMARCD3-211ENST00000485592 IFNA21P01568 189 aa9.87□□□□□ -0.83
SMARCD3-211ENST00000485592 TRIM16LQ309B1 348 aa9.87□□□□□ -0.83
SMARCD3-211ENST00000485592 TIGITQ495A1 244 aa9.87□□□□□ -0.83
SMARCD3-211ENST00000485592 C16orf54Q6UWD8 224 aa9.87□□□□□ -0.83
SMARCD3-211ENST00000485592 Q6ZRM9 215 aa9.87□□□□□ -0.83
SMARCD3-211ENST00000485592 RNASE11Q8TAA1 199 aaKnown RBP9.87□□□□□ -0.83
SMARCD3-211ENST00000485592 Q8WTZ3 238 aa9.87□□□□□ -0.83
SMARCD3-211ENST00000485592 XCL2Q9UBD3 114 aa9.87□□□□□ -0.83
SMARCD3-211ENST00000485592 TMEM56-RWDD3S4R434 201 aa9.87□□□□□ -0.83
SMARCD3-211ENST00000485592 FAT2Q9NYQ8 4349 aa9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 LINC00854A0A1B0GVQ3 168 aa9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 TMEM189A5PLL7 270 aa9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 IGKV1-17P01599 117 aa9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 SPART-AS1P0CW21 52 aa9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 DHODHQ02127 395 aa9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 MLANAQ16655 118 aa9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 AARDQ4LEZ3 155 aa9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 SELENOHQ8IZQ5 122 aaKnown RBP9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 OR1S2Q8NGQ3 325 aa9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 GLMPQ8WWB7 406 aa9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 RBPMSQ93062 196 aaKnown RBP9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 RRNAD1Q96FB5 475 aaKnown RBP9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 SLC25A21Q9BQT8 299 aaPredicted RBP9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 U3KQE9 123 aa9.86□□□□□ -0.83
SMARCD3-211ENST00000485592 NAP1L6A6NFF2 107 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 NDUFB6O95139 128 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 AKR1C4P17516 323 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 SOHLH1Q5JUK2 328 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 TMEM268Q5VZI3 342 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 TMED4Q7Z7H5 227 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 SCGB3A2Q96PL1 93 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 NEU1Q99519 415 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 CCDC32Q9BV29 185 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 SCRT1Q9BWW7 348 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 SEPSECSQ9HD40 501 aaKnown RBP9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 FLVCR2Q9UPI3 526 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 DNAH2Q9P225 4427 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 MUC4Q99102 2169 aa9.85□□□□□ -0.83
SMARCD3-211ENST00000485592 PKHD1P08F94 4074 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 IGLV2-18A0A075B6J9 118 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 TEX48A0A1B0GUV7 120 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 FAM90A26D6RGX4 464 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 H3BMM0 161 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 IL4P05112 153 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 IGLC1P0CG04 106 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 SLC25A4P12235 298 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 OR10J1P30954 320 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 HTR2BP41595 481 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 YPEL3P61236 119 aaPredicted RBP9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 PPP1R1AQ13522 171 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 BSXQ3C1V8 233 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 TMEM128Q5BJH2 165 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 NMSQ5H8A3 153 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 SIGLEC15Q6ZMC9 328 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 IL22RA2Q969J5 263 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 FAM210BQ96KR6 192 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 NRN1Q9NPD7 142 aa9.84□□□□□ -0.83
SMARCD3-211ENST00000485592 SMIM9A6NGZ8 99 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 HLA-DRB4P13762 266 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 INPP1P49441 399 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 RND2P52198 227 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 EMP1P54849 157 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 SPCS3P61009 180 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 IFITM3Q01628 133 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 ETFRF1Q6IPR1 90 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 ZNF705AQ6ZN79 300 aaPredicted RBP9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 FAM219AQ8IW50 185 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 GPR146Q96CH1 333 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 C7orf50Q9BRJ6 194 aaKnown RBP9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 CACNG5Q9UF02 275 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 HLA-DRB4X5D2U9 266 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 DNAH17Q9UFH2 4485 aa9.83□□□□□ -0.84
SMARCD3-211ENST00000485592 IGHV3OR16-12A0A075B7B8 117 aa9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 A0A0B4J2A0 478 aa9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 ZNF705FA8MVS1 300 aaPredicted RBP9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 LYRM1O43325 122 aa9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 ZNF705DP0CH99 300 aaPredicted RBP9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 ZNF705BP0CI00 300 aaPredicted RBP9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 NKX2-1P43699 371 aaPredicted RBP9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 USF2Q15853 346 aaPredicted RBP9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 C2orf83Q53S99 150 aa9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 PRSS54Q6PEW0 395 aa9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 LYZL2Q7Z4W2 148 aa9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 LRTM2Q8N967 370 aa9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 OR52E5Q8NH55 327 aa9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 RNASEH2CQ8TDP1 164 aaKnown RBP9.82□□□□□ -0.84
SMARCD3-211ENST00000485592 S100ZQ8WXG8 99 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms