RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 RAB5CP51148 216 aa13.52□□□□□ -0.25
CCDC78-214ENST00000485091 KIAA0141Q14154 515 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-214ENST00000485091 KHDC1LQ5JSQ8 128 aa13.52□□□□□ -0.25
CCDC78-214ENST00000485091 ZNF491Q8N8L2 437 aa13.52□□□□□ -0.25
CCDC78-214ENST00000485091 OR1B1Q8NGR6 318 aa13.52□□□□□ -0.25
CCDC78-214ENST00000485091 PBDC1Q9BVG4 233 aa13.52□□□□□ -0.25
CCDC78-214ENST00000485091 HMGB3O15347 200 aaKnown RBP13.51□□□□□ -0.25
CCDC78-214ENST00000485091 TGOLN2O43493 480 aa13.51□□□□□ -0.25
CCDC78-214ENST00000485091 LYZP61626 148 aa13.51□□□□□ -0.25
CCDC78-214ENST00000485091 CLLU1Q5K131 121 aa13.51□□□□□ -0.25
CCDC78-214ENST00000485091 RPP25LQ8N5L8 163 aaKnown RBP13.51□□□□□ -0.25
CCDC78-214ENST00000485091 OR4F5Q8NH21 305 aa13.51□□□□□ -0.25
CCDC78-214ENST00000485091 SLC25A22Q9H936 323 aa13.51□□□□□ -0.25
CCDC78-214ENST00000485091 GAR1Q9NY12 217 aaKnown RBP13.51□□□□□ -0.25
CCDC78-214ENST00000485091 RNF114Q9Y508 228 aa13.51□□□□□ -0.25
CCDC78-214ENST00000485091 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.5□□□□□ -0.25
CCDC78-214ENST00000485091 TEX46H3BTG2 121 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 TOMM40O96008 361 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 FABP1P07148 127 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 OR5G3P0C626 314 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 ARL3P36405 182 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 ZNF343Q6P1L6 599 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 SSX7Q7RTT5 188 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 LRRC20Q8TCA0 184 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 Q8WTZ3 238 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 IGHV3OR16-8A0A075B7F1 116 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 COX7A2P2O60397 106 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 YPEL3P61236 119 aaPredicted RBP13.5□□□□□ -0.25
CCDC78-214ENST00000485091 ZNF726P1Q15940 193 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 TCTEX1D4Q5JR98 221 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 PXDC1Q5TGL8 231 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 SPATA31B1PQ5VZV4 182 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 COMMD1Q8N668 190 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 OR51G1Q8NGK1 321 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 HRH4Q9H3N8 390 aa13.5□□□□□ -0.25
CCDC78-214ENST00000485091 PUS1Q9Y606 427 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCDC78-214ENST00000485091 A0A1W2PPV4 95 aa13.49□□□□□ -0.25
CCDC78-214ENST00000485091 IL4P05112 153 aa13.49□□□□□ -0.25
CCDC78-214ENST00000485091 BLOC1S1P78537 153 aa13.49□□□□□ -0.25
CCDC78-214ENST00000485091 FAM78BQ5VT40 261 aa13.49□□□□□ -0.25
CCDC78-214ENST00000485091 LCN15Q6UWW0 184 aa13.49□□□□□ -0.25
CCDC78-214ENST00000485091 C18orf65Q6ZTR6 163 aa13.49□□□□□ -0.25
CCDC78-214ENST00000485091 RNF152Q8N8N0 203 aa13.49□□□□□ -0.25
CCDC78-214ENST00000485091 TMEM37Q8WXS4 190 aa13.49□□□□□ -0.25
CCDC78-214ENST00000485091 SAT2Q96F10 170 aaPredicted RBP13.49□□□□□ -0.25
CCDC78-214ENST00000485091 RCC1LQ96I51 464 aaKnown RBP13.49□□□□□ -0.25
CCDC78-214ENST00000485091 ACTR3CQ9C0K3 210 aaPredicted RBP13.49□□□□□ -0.25
CCDC78-214ENST00000485091 CLPSL1A2RUU4 121 aa13.48□□□□□ -0.25
CCDC78-214ENST00000485091 H2AFB1P0C5Y9 115 aa13.48□□□□□ -0.25
CCDC78-214ENST00000485091 CDC34P49427 236 aaPredicted RBP13.48□□□□□ -0.25
CCDC78-214ENST00000485091 FGF8P55075 233 aaPredicted RBP13.48□□□□□ -0.25
CCDC78-214ENST00000485091 PATE2Q6UY27 113 aa13.48□□□□□ -0.25
CCDC78-214ENST00000485091 DPPA3Q6W0C5 159 aa13.48□□□□□ -0.25
CCDC78-214ENST00000485091 SFT2D1Q8WV19 159 aa13.48□□□□□ -0.25
CCDC78-214ENST00000485091 UHRF2Q96PU4 802 aa13.48□□□□□ -0.25
CCDC78-214ENST00000485091 SEPSECSQ9HD40 501 aaKnown RBP13.48□□□□□ -0.25
CCDC78-214ENST00000485091 DNAJC4Q9NNZ3 241 aa13.48□□□□□ -0.25
CCDC78-214ENST00000485091 PEF1Q9UBV8 284 aaKnown RBP13.48□□□□□ -0.25
CCDC78-214ENST00000485091 HYPMO75409 117 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 OR2C1O95371 312 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 CD28P10747 220 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 C10orf113Q5VZT2 155 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 SPSB3Q6PJ21 355 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 ZNF600Q6ZNG1 722 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 OR1L4Q8NGR5 311 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 MYOZ3Q8TDC0 251 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 UBE2E2Q96LR5 201 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 MIR17HGQ75NE6 70 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.47□□□□□ -0.25
CCDC78-214ENST00000485091 WIPF2Q8TF74 440 aaPredicted RBP13.47□□□□□ -0.25
CCDC78-214ENST00000485091 RAB24Q969Q5 203 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 RNF125Q96EQ8 232 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 ATP6V0BQ99437 205 aa13.47□□□□□ -0.25
CCDC78-214ENST00000485091 JMJD1CQ15652 2540 aa13.46□□□□□ -0.25
CCDC78-214ENST00000485091 CTXND1A0A1B0GTU2 59 aa13.46□□□□□ -0.25
CCDC78-214ENST00000485091 WI2-2373I1.2A0A1W2PRP0 233 aa13.46□□□□□ -0.25
CCDC78-214ENST00000485091 BMPR1BO00238 502 aa13.46□□□□□ -0.25
CCDC78-214ENST00000485091 LGALS1P09382 135 aaKnown RBP13.46□□□□□ -0.25
CCDC78-214ENST00000485091 RHOBP62745 196 aa13.46□□□□□ -0.25
CCDC78-214ENST00000485091 RELQ04864 619 aaPredicted RBP13.46□□□□□ -0.25
CCDC78-214ENST00000485091 USF2Q15853 346 aaPredicted RBP13.46□□□□□ -0.25
CCDC78-214ENST00000485091 TOMM20LQ6UXN7 152 aa13.46□□□□□ -0.25
CCDC78-214ENST00000485091 ZNF414Q96IQ9 312 aa13.46□□□□□ -0.25
CCDC78-214ENST00000485091 PFDN5Q99471 154 aa13.46□□□□□ -0.25
CCDC78-214ENST00000485091 TRAV5A0A0B4J249 113 aa13.45□□□□□ -0.26
CCDC78-214ENST00000485091 A0A1W2PRX2 142 aa13.45□□□□□ -0.26
CCDC78-214ENST00000485091 MAP1LC3B2A6NCE7 125 aa13.45□□□□□ -0.26
CCDC78-214ENST00000485091 PROK1P58294 105 aa13.45□□□□□ -0.26
CCDC78-214ENST00000485091 KRTAP21-3Q3LHN1 58 aa13.45□□□□□ -0.26
CCDC78-214ENST00000485091 MORN5Q5VZ52 161 aa13.45□□□□□ -0.26
CCDC78-214ENST00000485091 LINC00305Q7Z4B0 112 aa13.45□□□□□ -0.26
CCDC78-214ENST00000485091 GATAD1Q8WUU5 269 aa13.45□□□□□ -0.26
CCDC78-214ENST00000485091 MAP1LC3BQ9GZQ8 125 aa13.45□□□□□ -0.26
CCDC78-214ENST00000485091 FUT9Q9Y231 359 aa13.45□□□□□ -0.26
CCDC78-214ENST00000485091 HIGD1AQ9Y241 93 aa13.45□□□□□ -0.26
CCDC78-214ENST00000485091 ELOA3CA0A087WX78 387 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-214ENST00000485091 SEC14L6B5MCN3 397 aa13.44□□□□□ -0.26
CCDC78-214ENST00000485091 ZNF207O43670 478 aaKnown RBP13.44□□□□□ -0.26
CCDC78-214ENST00000485091 GGCTO75223 188 aaKnown RBP13.44□□□□□ -0.26
CCDC78-214ENST00000485091 PLP1P60201 277 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms