RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 SLC35E4Q6ICL7 350 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 FAAP20Q6NZ36 180 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 OR10AD1Q8NGE0 317 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 ZNF420Q8TAQ5 688 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-205ENST00000485055 FXYD5Q96DB9 178 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 MALSU1Q96EH3 234 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 THTPAQ9BU02 230 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 NKX6-2Q9C056 277 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-205ENST00000485055 ALPK2Q86TB3 2170 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 IRGMA1A4Y4 181 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 LINC01619G3V211 115 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 NPFFO15130 113 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 PSG2P11465 335 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 CDK2P24941 298 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 SRSF4Q08170 494 aaKnown RBP4.08□□□□□ -1.76
CCDC39-205ENST00000485055 DEFB112Q30KQ8 113 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 ZNF506Q5JVG8 444 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 TMEM244Q5VVB8 128 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 OR5AS1Q8N127 324 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 OR51T1Q8NGJ9 327 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 OR6F1Q8NGZ6 308 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 TERB2Q8NHR7 220 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 CARD19Q96LW7 228 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 C17orf77Q96MU5 243 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 PBDC1Q9BVG4 233 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 SLIRPQ9GZT3 109 aaKnown RBP4.08□□□□□ -1.76
CCDC39-205ENST00000485055 OR2D2Q9H210 308 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 SETD2Q9BYW2 2564 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-205ENST00000485055 TMEM269A0A1B0GVZ9 245 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 LY6LH3BQJ8 138 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 NRASP01111 189 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 PIPP12273 146 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-205ENST00000485055 FOLR2P14207 255 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 HBG1P69891 147 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 HBG2P69892 147 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 ZNF322Q6U7Q0 402 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-205ENST00000485055 Q6ZTK2 550 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 VMO1Q7Z5L0 202 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 C12orf45Q8N5I9 185 aaPredicted RBP4.08□□□□□ -1.76
CCDC39-205ENST00000485055 OR8S1Q8NH09 359 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 BORCS7Q96B45 105 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 TMPRSS5Q9H3S3 457 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 HEXA-AS1Q9H8Q6 139 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 DKK2Q9UBU2 259 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 YTHDF2Q9Y5A9 579 aaKnown RBP4.08□□□□□ -1.76
CCDC39-205ENST00000485055 LINC00312Q9Y6C7 94 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 LOC107984640A0A0U1RRK4 108 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 CDRT1O95170 752 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 CYB5AP00167 134 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 HIST1H1BP16401 226 aaKnown RBP4.07□□□□□ -1.76
CCDC39-205ENST00000485055 NTF3P20783 257 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 RAB5CP51148 216 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 FAM201AQ5SY85 155 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 AWAT2Q6E213 333 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 MKXQ8IYA7 352 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 CD177Q8N6Q3 437 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 RHOXF1Q8NHV9 184 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 DNAH3Q8TD57 4116 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 RBFOX1Q9NWB1 397 aaKnown RBP4.07□□□□□ -1.76
CCDC39-205ENST00000485055 DNAJC27Q9NZQ0 273 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 MTFP1Q9UDX5 166 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 A6NDX4 124 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 I3L521 148 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 M0R2Z0 102 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 KBTBD11O94819 623 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 HLA-DPB1P04440 258 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 ATF1P18846 271 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 ORM2P19652 201 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 EBI3Q14213 229 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 HERPUD1Q15011 391 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 PMVKQ15126 192 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 BCL2L15Q5TBC7 163 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 RASL11AQ6T310 242 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 CEACAM19Q7Z692 300 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 LYPD6Q86Y78 171 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 C1orf158Q8N1D5 194 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 LINC00311Q8N616 119 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 ACY3Q96HD9 319 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 TMEM147Q9BVK8 224 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 GPR84Q9NQS5 396 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 PLSCR3Q9NRY6 295 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 KCNIP1Q9NZI2 227 aa4.07□□□□□ -1.76
CCDC39-205ENST00000485055 A0A1B0GWB2 263 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 PLAC8L1A1L4L8 177 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 MSGN1A6NI15 193 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 OR4C45A6NMZ5 311 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 FABP5P3A8MUU1 101 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 C9JAW5 83 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 GYPAP02724 150 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 ZNF137PP52743 207 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 HSD17B12Q53GQ0 312 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 IBA57Q5T440 356 aaKnown RBP4.06□□□□□ -1.76
CCDC39-205ENST00000485055 TEX261Q6UWH6 196 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 IL34Q6ZMJ4 242 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 PDZD9Q8IXQ8 264 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 METTL26Q96S19 204 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 HIGD1AQ9Y241 93 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 DUXBA0A1W2PPF3 345 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 GNGT2O14610 69 aa4.06□□□□□ -1.76
CCDC39-205ENST00000485055 GYPBP06028 91 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms