RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 TMEM126AQ9H061 195 aa2.06□□□□□ -2.08
VPS13A-211ENST00000484581 LAMTOR3Q9UHA4 124 aa2.06□□□□□ -2.08
VPS13A-211ENST00000484581 LHFPL6Q9Y693 200 aa2.06□□□□□ -2.08
VPS13A-211ENST00000484581 SCN8AQ9UQD0 1980 aa2.06□□□□□ -2.08
VPS13A-211ENST00000484581 FN1P02751 2386 aaKnown RBP2.06□□□□□ -2.08
VPS13A-211ENST00000484581 RP1P56715 2156 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 TRGV10A0A0A0MS01 117 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 ZNF737O75373 536 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 SHBGP04278 402 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 LTC4SQ16873 150 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 C22orf39Q6P5X5 142 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 ZNF826PQ6ZT77 177 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 PHF13Q86YI8 300 aaPredicted RBP2.05□□□□□ -2.08
VPS13A-211ENST00000484581 OR10J5Q8NHC4 309 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 TEX47Q8TBZ9 253 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 DYDC1Q8WWB3 177 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 AQP3Q92482 292 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 RTL8AQ9BWD3 113 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 NDUFAF1Q9Y375 327 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 PXDNLA1KZ92 1463 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 SMARCA4P51532 1647 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 MICAL3Q7RTP6 2002 aa2.05□□□□□ -2.08
VPS13A-211ENST00000484581 A0A1W2PRE2 83 aa2.04□□□□□ -2.08
VPS13A-211ENST00000484581 PCNX2A6NKB5 2137 aa2.04□□□□□ -2.08
VPS13A-211ENST00000484581 CACNA1GO43497 2377 aa2.04□□□□□ -2.08
VPS13A-211ENST00000484581 NBEAP1P0C6P0 100 aa2.04□□□□□ -2.08
VPS13A-211ENST00000484581 C7orf65Q6ZTY9 151 aa2.04□□□□□ -2.08
VPS13A-211ENST00000484581 PDZD9Q8IXQ8 264 aa2.04□□□□□ -2.08
VPS13A-211ENST00000484581 C3orf56Q8N813 242 aa2.04□□□□□ -2.08
VPS13A-211ENST00000484581 ZCCHC13Q8WW36 166 aaKnown RBP2.04□□□□□ -2.08
VPS13A-211ENST00000484581 GPX7Q96SL4 187 aaPredicted RBP2.04□□□□□ -2.08
VPS13A-211ENST00000484581 PRADC1Q9BSG0 188 aa2.04□□□□□ -2.08
VPS13A-211ENST00000484581 MRPL32Q9BYC8 188 aaKnown RBP2.04□□□□□ -2.08
VPS13A-211ENST00000484581 YIPF3Q9GZM5 350 aa2.04□□□□□ -2.08
VPS13A-211ENST00000484581 MED11Q9P086 117 aa2.04□□□□□ -2.08
VPS13A-211ENST00000484581 ARHGEF28Q8N1W1 1705 aaKnown RBP2.03□□□□□ -2.08
VPS13A-211ENST00000484581 MEIKINA0A087WXM9 373 aa2.03□□□□□ -2.08
VPS13A-211ENST00000484581 IFNA14P01570 189 aa2.03□□□□□ -2.08
VPS13A-211ENST00000484581 UBE2BP63146 152 aa2.03□□□□□ -2.08
VPS13A-211ENST00000484581 LINC00471Q8N535 108 aa2.03□□□□□ -2.08
VPS13A-211ENST00000484581 OR2T10Q8NGZ9 312 aa2.03□□□□□ -2.08
VPS13A-211ENST00000484581 PCDH15Q96QU1 1955 aa2.03□□□□□ -2.08
VPS13A-211ENST00000484581 SBF1O95248 1867 aa2.03□□□□□ -2.09
VPS13A-211ENST00000484581 DISP1Q96F81 1524 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 MED12LQ86YW9 2145 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 IGKV1D-42A0A075B6H8 117 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 TLCD2A6NGC4 264 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 E7EQ34 232 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 TSTD3H0UI37 97 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 TMEM256-PLSCR3K7ERE1 68 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 OR2T1O43869 369 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 TRGC2P03986 189 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 FKBP2P26885 142 aaKnown RBP2.02□□□□□ -2.09
VPS13A-211ENST00000484581 INSL3P51460 131 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 SPANXN5Q5MJ07 72 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 BRMS1LQ5PSV4 323 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 TOMM20LQ6UXN7 152 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 PYDC1Q8WXC3 89 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 CST9LQ9H4G1 147 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 C19orf12Q9NSK7 152 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 TAS2R4Q9NYW5 299 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 FREM1Q5H8C1 2179 aa2.02□□□□□ -2.09
VPS13A-211ENST00000484581 MYH10P35580 1976 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 STRCP1A6NGW2 1772 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 BAALC-AS2P0C853 105 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 HLA-EP13747 358 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 DYNLT3P51808 116 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 DYNLT1P63172 113 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 ELOBQ15370 118 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 Q1T7F1 81 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 TMEM128Q5BJH2 165 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 FKBP1CQ5VVH2 108 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 C1orf140Q5VVS0 124 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 RNASE11Q8TAA1 199 aaKnown RBP2.01□□□□□ -2.09
VPS13A-211ENST00000484581 MBD3L1Q8WWY6 194 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 RMND5BQ96G75 393 aaPredicted RBP2.01□□□□□ -2.09
VPS13A-211ENST00000484581 CCDC32Q9BV29 185 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 POPDC3Q9HBV1 291 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 TMEM106BQ9NUM4 274 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 OR52A1Q9UKL2 312 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 NUBP2Q9Y5Y2 271 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 RIMBP3CA6NJZ7 1639 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 RIMBP3BA6NNM3 1639 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 ZCCHC11Q5TAX3 1644 aaKnown RBP2.01□□□□□ -2.09
VPS13A-211ENST00000484581 RIMBP3Q9UFD9 1639 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 GBF1Q92538 1859 aa2.01□□□□□ -2.09
VPS13A-211ENST00000484581 STRCQ7RTU9 1775 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 HEATR5BQ9P2D3 2071 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 FUOMA2VDF0 154 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 NDUFB3O43676 98 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 UBBP0CG47 229 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 MIFP14174 115 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 S100GP29377 79 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 MYL5Q02045 173 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 ZNF846Q147U1 533 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 RTL8BQ17RB0 113 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 KRTAP6-3Q3LI67 103 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 SLC30A7Q8NEW0 376 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 PPTC7Q8NI37 304 aa2□□□□□ -2.09
VPS13A-211ENST00000484581 GRPEL2Q8TAA5 225 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms