RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 LYRM9A8MSI8 78 aa12.39□□□□□ -0.43
DDR1-245ENST00000484556 HNRNPCP07910 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
DDR1-245ENST00000484556 HOXA1P49639 335 aaPredicted RBP12.39□□□□□ -0.43
DDR1-245ENST00000484556 PRCDQ00LT1 54 aa12.39□□□□□ -0.43
DDR1-245ENST00000484556 LPCAT3Q6P1A2 487 aa12.39□□□□□ -0.43
DDR1-245ENST00000484556 TMEM208Q9BTX3 173 aa12.39□□□□□ -0.43
DDR1-245ENST00000484556 NAA50Q9GZZ1 169 aaKnown RBP12.39□□□□□ -0.43
DDR1-245ENST00000484556 SEPSECSQ9HD40 501 aaKnown RBP12.39□□□□□ -0.43
DDR1-245ENST00000484556 ZNF705GA8MUZ8 300 aaPredicted RBP12.38□□□□□ -0.43
DDR1-245ENST00000484556 M0QYG6 137 aa12.38□□□□□ -0.43
DDR1-245ENST00000484556 CLN5O75503 358 aa12.38□□□□□ -0.43
DDR1-245ENST00000484556 ATP5G1P05496 136 aa12.38□□□□□ -0.43
DDR1-245ENST00000484556 RCVRNP35243 200 aa12.38□□□□□ -0.43
DDR1-245ENST00000484556 ATP5G3P48201 142 aa12.38□□□□□ -0.43
DDR1-245ENST00000484556 UCP3P55916 312 aa12.38□□□□□ -0.43
DDR1-245ENST00000484556 ERHP84090 104 aaKnown RBP12.38□□□□□ -0.43
DDR1-245ENST00000484556 SIGLEC15Q6ZMC9 328 aa12.38□□□□□ -0.43
DDR1-245ENST00000484556 LINC00052Q96N35 136 aa12.38□□□□□ -0.43
DDR1-245ENST00000484556 TSC22D3Q99576 134 aa12.38□□□□□ -0.43
DDR1-245ENST00000484556 FAM212BQ9NTI7 297 aaPredicted RBP12.38□□□□□ -0.43
DDR1-245ENST00000484556 RORCP51449 518 aa12.37□□□□□ -0.43
DDR1-245ENST00000484556 RNASE12Q5GAN4 147 aaKnown RBP12.37□□□□□ -0.43
DDR1-245ENST00000484556 FOXI2Q6ZQN5 318 aa12.37□□□□□ -0.43
DDR1-245ENST00000484556 UPK3BQ9BT76 320 aa12.37□□□□□ -0.43
DDR1-245ENST00000484556 F6UB75 175 aa12.36□□□□□ -0.43
DDR1-245ENST00000484556 IGKV1-17P01599 117 aa12.36□□□□□ -0.43
DDR1-245ENST00000484556 S100GP29377 79 aa12.36□□□□□ -0.43
DDR1-245ENST00000484556 PSG9Q00887 426 aa12.36□□□□□ -0.43
DDR1-245ENST00000484556 CTF1Q16619 201 aa12.36□□□□□ -0.43
DDR1-245ENST00000484556 MLANAQ16655 118 aa12.36□□□□□ -0.43
DDR1-245ENST00000484556 H2BFWTQ7Z2G1 175 aa12.36□□□□□ -0.43
DDR1-245ENST00000484556 OR4C16Q8NGL9 310 aa12.36□□□□□ -0.43
DDR1-245ENST00000484556 OR4A16Q8NH70 328 aa12.36□□□□□ -0.43
DDR1-245ENST00000484556 MRGPRFQ96AM1 343 aa12.36□□□□□ -0.43
DDR1-245ENST00000484556 FNDC4Q9H6D8 234 aaPredicted RBP12.36□□□□□ -0.43
DDR1-245ENST00000484556 KLK11Q9UBX7 282 aa12.36□□□□□ -0.43
DDR1-245ENST00000484556 FAM25AB3EWG3 89 aa12.35□□□□□ -0.43
DDR1-245ENST00000484556 FAM25CB3EWG5 89 aa12.35□□□□□ -0.43
DDR1-245ENST00000484556 FAM25GB3EWG6 89 aa12.35□□□□□ -0.43
DDR1-245ENST00000484556 PI3P19957 117 aa12.35□□□□□ -0.43
DDR1-245ENST00000484556 GCSHP23434 173 aa12.35□□□□□ -0.43
DDR1-245ENST00000484556 ZNF79Q15937 498 aa12.35□□□□□ -0.43
DDR1-245ENST00000484556 ESRGQ1W209 222 aa12.35□□□□□ -0.43
DDR1-245ENST00000484556 IZUMO4Q1ZYL8 232 aa12.35□□□□□ -0.43
DDR1-245ENST00000484556 CD3DP04234 171 aa12.34□□□□□ -0.43
DDR1-245ENST00000484556 SMIM18P0DKX4 95 aa12.34□□□□□ -0.43
DDR1-245ENST00000484556 OPRK1P41145 380 aa12.34□□□□□ -0.43
DDR1-245ENST00000484556 HSPE1P61604 102 aaKnown RBP12.34□□□□□ -0.43
DDR1-245ENST00000484556 FAM78BQ5VT40 261 aa12.34□□□□□ -0.43
DDR1-245ENST00000484556 MZT2AQ6P582 158 aa12.34□□□□□ -0.43
DDR1-245ENST00000484556 LHFPL1Q86WI0 220 aa12.34□□□□□ -0.43
DDR1-245ENST00000484556 OR4X1Q8NH49 305 aa12.34□□□□□ -0.43
DDR1-245ENST00000484556 OR52I2Q8NH67 350 aa12.34□□□□□ -0.43
DDR1-245ENST00000484556 CLUHP3Q96NS8 147 aa12.34□□□□□ -0.43
DDR1-245ENST00000484556 MRPS26Q9BYN8 205 aaKnown RBP12.34□□□□□ -0.43
DDR1-245ENST00000484556 WDR12Q9GZL7 423 aaKnown RBP12.34□□□□□ -0.43
DDR1-245ENST00000484556 MRPS16Q9Y3D3 137 aaKnown RBP12.34□□□□□ -0.43
DDR1-245ENST00000484556 TNFRSF18Q9Y5U5 241 aa12.34□□□□□ -0.43
DDR1-245ENST00000484556 A0A087WTM6 91 aa12.33□□□□□ -0.44
DDR1-245ENST00000484556 PLAC8L1A1L4L8 177 aa12.33□□□□□ -0.44
DDR1-245ENST00000484556 GABARAPO95166 117 aa12.33□□□□□ -0.44
DDR1-245ENST00000484556 IGKV1-5P01602 117 aa12.33□□□□□ -0.44
DDR1-245ENST00000484556 SNCAP37840 140 aa12.33□□□□□ -0.44
DDR1-245ENST00000484556 GNPNAT1Q96EK6 184 aaPredicted RBP12.33□□□□□ -0.44
DDR1-245ENST00000484556 TP53RKQ96S44 253 aa12.33□□□□□ -0.44
DDR1-245ENST00000484556 ABHD1Q96SE0 405 aa12.33□□□□□ -0.44
DDR1-245ENST00000484556 EXTL2Q9UBQ6 330 aa12.33□□□□□ -0.44
DDR1-245ENST00000484556 TRAV26-1A0A087WT03 109 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 A0A0J9YY99 117 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 CBY3A6NI87 242 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 SCGB2A1O75556 95 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 P0C879 139 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 PGAM2P15259 253 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 ZNF182P17025 639 aaPredicted RBP12.32□□□□□ -0.44
DDR1-245ENST00000484556 RND3P61587 244 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 RNASE10Q5GAN6 216 aaKnown RBP12.32□□□□□ -0.44
DDR1-245ENST00000484556 GPR107Q5VW38 600 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 OR4D10Q8NGI6 311 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 COQ8AQ8NI60 647 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 IGF2BP2-AS1Q96M15 143 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 MTFP1Q9UDX5 166 aa12.32□□□□□ -0.44
DDR1-245ENST00000484556 A0A0B4J293 547 aa12.31□□□□□ -0.44
DDR1-245ENST00000484556 BUB3O43684 328 aa12.31□□□□□ -0.44
DDR1-245ENST00000484556 RNASE2P10153 161 aaKnown RBP12.31□□□□□ -0.44
DDR1-245ENST00000484556 AZU1P20160 251 aa12.31□□□□□ -0.44
DDR1-245ENST00000484556 PIGPP57054 158 aa12.31□□□□□ -0.44
DDR1-245ENST00000484556 DHODHQ02127 395 aa12.31□□□□□ -0.44
DDR1-245ENST00000484556 OR5I1Q13606 314 aa12.31□□□□□ -0.44
DDR1-245ENST00000484556 ZNF486Q96H40 463 aaPredicted RBP12.31□□□□□ -0.44
DDR1-245ENST00000484556 MIXL1Q9H2W2 232 aa12.31□□□□□ -0.44
DDR1-245ENST00000484556 IL4P05112 153 aa12.3□□□□□ -0.44
DDR1-245ENST00000484556 SP6Q3SY56 376 aa12.3□□□□□ -0.44
DDR1-245ENST00000484556 ARRDC1Q8N5I2 433 aa12.3□□□□□ -0.44
DDR1-245ENST00000484556 SLC35G3Q8N808 338 aa12.3□□□□□ -0.44
DDR1-245ENST00000484556 Q8WTZ3 238 aa12.3□□□□□ -0.44
DDR1-245ENST00000484556 AP3S1Q92572 193 aa12.3□□□□□ -0.44
DDR1-245ENST00000484556 C3orf85A0A1B0GTC6 90 aa12.29□□□□□ -0.44
DDR1-245ENST00000484556 CORTO00230 105 aa12.29□□□□□ -0.44
DDR1-245ENST00000484556 IGLC1P0CG04 106 aa12.29□□□□□ -0.44
DDR1-245ENST00000484556 PAX9P55771 341 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms