RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ANP32AP39687 249 aaKnown RBP0.37□□□□□ -2.35
SCAF11-207ENST00000484275 CCL7P80098 99 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 C12orf45Q8N5I9 185 aaPredicted RBP0.37□□□□□ -2.35
SCAF11-207ENST00000484275 LINC00301Q8NCQ3 95 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 OR51A2Q8NGJ7 313 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 OR13D1Q8NGV5 346 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 OR2T10Q8NGZ9 312 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 FAM172AQ8WUF8 416 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 PPP1R14BQ96C90 147 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 OR51V1Q9H2C8 321 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 UCK1Q9HA47 277 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 C14orf132Q9NPU4 83 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 TVP23BQ9NYZ1 205 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 IDI2-AS1Q9NZ38 188 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 GLTPQ9NZD2 209 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 MYO5AQ9Y4I1 1855 aaKnown RBP0.37□□□□□ -2.35
SCAF11-207ENST00000484275 APCP25054 2843 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 PTPRDP23468 1912 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 ASH1LQ9NR48 2969 aaKnown RBP0.36□□□□□ -2.35
SCAF11-207ENST00000484275 MYO18AQ92614 2054 aaKnown RBP0.36□□□□□ -2.35
SCAF11-207ENST00000484275 A0A087WUJ7 227 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 TMEM114B3SHH9 223 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 INE1O15225 51 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 CYB5BO43169 146 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 E2F6O75461 281 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 SERPINE1P05121 402 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 ZNF93P35789 620 aaPredicted RBP0.36□□□□□ -2.35
SCAF11-207ENST00000484275 DEFA1P59665 94 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 ITGB3BPQ13352 177 aaPredicted RBP0.36□□□□□ -2.35
SCAF11-207ENST00000484275 ESRGQ1W209 222 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 AKIRIN2Q53H80 203 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 RNASE10Q5GAN6 216 aaKnown RBP0.36□□□□□ -2.35
SCAF11-207ENST00000484275 C1orf137Q5JT78 98 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 BRMS1LQ5PSV4 323 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 GDF5OSQ5U4N7 250 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 LYRM7Q5U5X0 104 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 Q6Q795 121 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 LCA10Q71F78 164 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 C3orf56Q8N813 242 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 Q8N814 137 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 OR52L1Q8NGH7 329 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 BTF3L4Q96K17 158 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 OBSCN-AS1Q96MR7 158 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 HIST1H2BLQ99880 126 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 LINC00467Q9BRT7 94 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 HEATR1Q9H583 2144 aaKnown RBP0.36□□□□□ -2.35
SCAF11-207ENST00000484275 V9GYY5 206 aaPredicted RBP0.36□□□□□ -2.35
SCAF11-207ENST00000484275 CNTRLQ7Z7A1 2325 aa0.36□□□□□ -2.35
SCAF11-207ENST00000484275 COL24A1Q17RW2 1714 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 ARHGEF11O15085 1522 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 TRBV6-8A0A0A6YYG3 113 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 C1orf196B1AJZ1 125 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 ZNF736B4DX44 427 aaPredicted RBP0.35□□□□□ -2.35
SCAF11-207ENST00000484275 CLDN25C9JDP6 229 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 SMIM17P0DL12 118 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 RNASE4P34096 147 aaKnown RBP0.35□□□□□ -2.35
SCAF11-207ENST00000484275 RHOBP62745 196 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 SPA17Q15506 151 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 MPV17LQ2QL34 196 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 LIN52Q52LA3 116 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 SOSTDC1Q6X4U4 206 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 OR52R1Q8NGF1 315 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 OR8D4Q8NGM9 314 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 WFDC5Q8TCV5 224 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 GNPDA2Q8TDQ7 276 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 SLAMF6Q96DU3 332 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 ADAT3Q96EY9 351 aaPredicted RBP0.35□□□□□ -2.35
SCAF11-207ENST00000484275 PRAP1Q96NZ9 151 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 YPEL2Q96QA6 119 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 KIFC1Q9BW19 673 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 TMEM133Q9H2Q1 129 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 PARVBQ9HBI1 364 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 BCL2L10Q9HD36 194 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 C14orf105Q9NVL8 296 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 FBXO5Q9UKT4 447 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 PRELID3BQ9Y3B1 194 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 ZFYVE9O95405 1425 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 FANCMQ8IYD8 2048 aa0.35□□□□□ -2.35
SCAF11-207ENST00000484275 ZCCHC11Q5TAX3 1644 aaKnown RBP0.35□□□□□ -2.35
SCAF11-207ENST00000484275 TRBV19A0A075B6N1 114 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 TRGV10A0A0A0MS01 117 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 TRAV3A0A0B4J244 114 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 TRAV4A0A0B4J268 109 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 MAST4O15021 2626 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 GGCTO75223 188 aaKnown RBP0.34□□□□□ -2.36
SCAF11-207ENST00000484275 OR7C1O76099 320 aaPredicted RBP0.34□□□□□ -2.36
SCAF11-207ENST00000484275 S100A6P06703 90 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 ERP29P30040 261 aaKnown RBP0.34□□□□□ -2.36
SCAF11-207ENST00000484275 SRP14P37108 136 aaKnown RBP0.34□□□□□ -2.36
SCAF11-207ENST00000484275 MYL6P60660 151 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 ERVS71-1P61550 626 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 FADDQ13158 208 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 DEFB113Q30KQ7 82 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 BCORL1Q5H9F3 1711 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 SLC30A7Q8NEW0 376 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 TMEM254Q8TBM7 123 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 SLC25A40Q8TBP6 338 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 PATE1Q8WXA2 126 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 SIGMAR1Q99720 223 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 PRADC1Q9BSG0 188 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms