RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RNF2Q99496 336 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 MEGF8Q7Z7M0 2845 aa5.47□□□□□ -1.53
BRCA1-216ENST00000484087 IGLC7A0M8Q6 106 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 C9JQL5 133 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 E7EUB6 86 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 M0R036 132 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 NDUFS6O75380 124 aaKnown RBP5.46□□□□□ -1.53
BRCA1-216ENST00000484087 CXorf1O96002 111 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 REG1AP05451 166 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 SRP19P09132 144 aaKnown RBP5.46□□□□□ -1.53
BRCA1-216ENST00000484087 OR10J1P30954 320 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 TAS2R45P59539 299 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 SELENOTP62341 195 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 EBI3Q14213 229 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 ICAM4Q14773 271 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 C5orf64Q2M2E5 130 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 TMEM86BQ8N661 226 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 CLRN3Q8NCR9 226 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 OR1L4Q8NGR5 311 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 MISP3Q96FF7 219 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 PFDN5Q99471 154 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 TXNDC17Q9BRA2 123 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 NIPSNAP3BQ9BS92 247 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 ZNF747Q9BV97 191 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 SCRT1Q9BWW7 348 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 RNF114Q9Y508 228 aa5.46□□□□□ -1.53
BRCA1-216ENST00000484087 F11RQ9Y624 299 aaKnown RBP5.46□□□□□ -1.53
BRCA1-216ENST00000484087 MGAM2Q2M2H8 2515 aa5.46□□□□□ -1.54
BRCA1-216ENST00000484087 CLPSL1A2RUU4 121 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 CGB1A6NKQ9 187 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 HMGB3O15347 200 aaKnown RBP5.45□□□□□ -1.54
BRCA1-216ENST00000484087 SCGB2A1O75556 95 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 FABP1P07148 127 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 PROK1P58294 105 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 MEF2BQ02080 365 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-216ENST00000484087 FXYD3Q14802 87 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 RHEBQ15382 184 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 MRGPRG-AS1Q2M3A8 158 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 ZNF562Q6V9R5 426 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 CYP2G1PQ6ZSU1 146 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 SSX7Q7RTT5 188 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 OR4F5Q8NH21 305 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 RASL11BQ9BPW5 248 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 MEGF9Q9H1U4 602 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 THYN1Q9P016 225 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 SLC45A2Q9UMX9 530 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 PUS1Q9Y606 427 aaKnown RBP eCLIP5.45□□□□□ -1.54
BRCA1-216ENST00000484087 TNCP24821 2201 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 WNK1Q9H4A3 2382 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 TCRBV4S1A1TA0A5B7 111 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 A6NDX4 124 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 TEX22C9J3V5 150 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 TMEM250H0YL14 139 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 FCN1O00602 326 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 CLN5O75503 358 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 YIF1AO95070 293 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 NDUFA7O95182 113 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 STAG3L2P0CL84 134 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 STAG3L3P0CL85 134 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 AREGP15514 252 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 BLCAPP62952 87 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 PNRC1Q12796 327 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-216ENST00000484087 FAM74A3Q4VXF1 159 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 AKIRIN2Q53H80 203 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 FAM78BQ5VT40 261 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 ATRAIDQ6UW56 229 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 C10orf99Q6UWK7 81 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 CYB561D1Q8N8Q1 229 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 OR2T6Q8NHC8 308 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 GATAD1Q8WUU5 269 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 NPIPB3Q92617 1050 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 ARPC1AQ92747 370 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 TVP23CQ96ET8 276 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 MRPL32Q9BYC8 188 aaKnown RBP5.45□□□□□ -1.54
BRCA1-216ENST00000484087 ZNF702PQ9H963 129 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 RPS10P5Q9NQ39 176 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 SMCO4Q9NRQ5 59 aa5.45□□□□□ -1.54
BRCA1-216ENST00000484087 TECRQ9NZ01 308 aaKnown RBP5.45□□□□□ -1.54
BRCA1-216ENST00000484087 ZNF727A8MUV8 499 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 F6UZH7 168 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 F8W735 103 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-216ENST00000484087 TSPAN4O14817 238 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 PDE6DO43924 150 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 COX7A2P2O60397 106 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 CRYGCP07315 174 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 LINC00869P0C866 280 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 APELAP0DMC3 54 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 CTRB1P17538 263 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 NPBWR1P48145 328 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 RND2P52198 227 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 MLANAQ16655 118 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 GCSAMLQ5JQS6 135 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 CST9LP1Q5W188 147 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 PVRIGQ6DKI7 326 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 CTRB2Q6GPI1 263 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 SHISA2Q6UWI4 295 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 PQLC2Q6ZP29 291 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 S100A7AQ86SG5 101 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 Q8N6K4 173 aa5.44□□□□□ -1.54
BRCA1-216ENST00000484087 KLHDC1Q8N7A1 406 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms