RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 CR1LQ2VPA4 569 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 BOD1L2Q8IYS8 172 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 ZNF418Q8TF45 676 aaPredicted RBP9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 ADTRPQ96IZ2 230 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 FAM186AA6NE01 2351 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 OR5AL1P0C617 328 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 ERVK-16P61578 105 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 CXorf67Q86X51 503 aaPredicted RBP9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 MDS2Q8NDY4 140 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 GRAMD2BQ96HH9 432 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 METRNQ9UJH8 293 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 A0A1B0GXF2 115 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 DEFB108AA8MXU0 73 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 KIR2DS2P43631 304 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 FAM90A1Q86YD7 464 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 RFESDQ8TAC1 157 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 F11RQ9Y624 299 aaKnown RBP9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 TET2Q6N021 2002 aaPredicted RBP9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 SMAD7O15105 426 aaKnown RBP9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 CRYGCP07315 174 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 CSN3P07498 182 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 SMIM13P0DJ93 91 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 IGHV1-2P23083 117 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 TEPPQ6URK8 271 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 C20orf78Q9BR46 151 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 TMUB1Q9BVT8 246 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 TCF19Q9Y242 345 aa9.38□□□□□ -0.91
SEC61A1-205ENST00000483956 TRBV7-9A0A0J9YWB2 115 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 FNDC10F2Z333 226 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 TFF1P04155 84 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 C8orf86Q6ZUL3 223 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 CACNG8Q8WXS5 425 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 ZNF503Q96F45 646 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 CDX2Q99626 313 aaPredicted RBP9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 PLEKHA3Q9HB20 300 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 SLC25A10Q9UBX3 287 aaPredicted RBP9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 BRI3O95415 125 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 SPINK8P0C7L1 97 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 ZNF137PP52743 207 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 HOXA4Q00056 320 aaPredicted RBP9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 DEFB123Q8N688 67 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 GCSAMQ8N6F7 178 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 TMEM140Q9NV12 185 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 SPRR3Q9UBC9 169 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 PRR33A8MZF0 331 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 PRR20EP86478 221 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 PRR20CP86479 221 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 PRR20DP86480 221 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 PRR20BP86481 221 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 PRR20AP86496 221 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 ABHD12Q8N2K0 398 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 TMEM105Q8N8V8 129 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 TMEM167BQ9NRX6 74 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 ERG28Q9UKR5 140 aa9.37□□□□□ -0.91
SEC61A1-205ENST00000483956 C15orf61A6NNL5 157 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 F8W1H4 67 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 FXYD2P54710 66 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 HBBP68871 147 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 PCP2Q8IVA1 136 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 CD177Q8N6Q3 437 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 DDB2Q92466 427 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 DCTN5Q9BTE1 182 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 GNG12Q9UBI6 72 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 TRAV3A0A0B4J244 114 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 A0A1W2PRD5 423 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 A0A1W2PRF3 423 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 A0A1W2PRM7 423 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 IGKV3-15P01624 115 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 MT-ATP8P03928 68 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 GCSHP23434 173 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 VKORC1L1Q8N0U8 176 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 PIP4P2Q8N4L2 257 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 OR4X2Q8NGF9 303 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 OR9G4Q8NGQ1 327 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 GTSF1Q8WW33 167 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 S1PR3Q99500 378 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 ZNF747Q9BV97 191 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 IFI27L2Q9H2X8 130 aa9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 FOXA2Q9Y261 457 aaPredicted RBP9.36□□□□□ -0.91
SEC61A1-205ENST00000483956 TRGV5A0A0B4J1U4 118 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 H3BMG7 143 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 NKX2-8O15522 239 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 LAMTOR5O43504 91 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 CNIH1O95406 144 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 TAS2R45P59539 299 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 GPR82Q96P67 336 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 B5MCH6 92 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 LYZL6O75951 148 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 PRDX2P32119 198 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 LOXL3P58215 753 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 Q6ZT83 130 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 ATP5L2Q7Z4Y8 100 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 DEFB127Q9H1M4 99 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 TMEM14BQ9NUH8 114 aa9.35□□□□□ -0.91
SEC61A1-205ENST00000483956 A8MWL6 223 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 MGST3O14880 152 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 TIMM8AO60220 97 aaPredicted RBP9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 RPL39P5Q59GN2 51 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 FAM231DQ6ZW35 169 aa9.34□□□□□ -0.91
SEC61A1-205ENST00000483956 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms