RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 AMMECR1LQ6DCA0 310 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 C4orf22Q6V702 233 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 Q6ZS52 159 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 PHF5AQ7RTV0 110 aaKnown RBP2.67□□□□□ -1.98
PTCD3-214ENST00000483925 LINC00305Q7Z4B0 112 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 LYPD6Q86Y78 171 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 C1orf64Q8NEQ6 169 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 OR5D16Q8NGK9 328 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 PRADC1Q9BSG0 188 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 NPCDR1Q9BY65 106 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 HS3ST2Q9Y278 367 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 RNF11Q9Y3C5 154 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 OVOS2A0A0J9YW53 1432 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 RIC1Q4ADV7 1423 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 OVOS2Q6IE36 1432 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 C11orf86A6NJI1 115 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 F8W036 122 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 H7C2G1 150 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 K7EM74 188 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 DLEU1O43261 78 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 PAEPP09466 180 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 COX6A1P12074 109 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 FUSP35637 526 aaKnown RBP eCLIP2.66□□□□□ -1.98
PTCD3-214ENST00000483925 FXYD2P54710 66 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 NCS1P62166 190 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 SUPT4H1P63272 117 aaKnown RBP2.66□□□□□ -1.98
PTCD3-214ENST00000483925 TMEM136Q6ZRR5 245 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 SLC30A7Q8NEW0 376 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 OR4S1Q8NGB4 309 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 OR4K15Q8NH41 348 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 TMEM203Q969S6 136 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 NHP2Q9NX24 153 aaKnown RBP2.66□□□□□ -1.98
PTCD3-214ENST00000483925 OR5AC2Q9NZP5 309 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 ERG28Q9UKR5 140 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 BAIAP2Q9UQB8 552 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 NLRC5Q86WI3 1866 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 SCN1AP35498 2009 aa2.66□□□□□ -1.98
PTCD3-214ENST00000483925 DOCK8Q8NF50 2099 aa2.65□□□□□ -1.98
PTCD3-214ENST00000483925 TRAV13-1A0A0B4J241 112 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 K7ERU9 68 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 CPSF4O95639 269 aaKnown RBP2.65□□□□□ -1.99
PTCD3-214ENST00000483925 KRTAP1-4P0C5Y4 121 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 ZNF14P17017 642 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-214ENST00000483925 KRTAP10-8P60410 259 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 SELENOWP63302 87 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 Q5XG85 94 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 SLC35E3Q7Z769 313 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 PDZD9Q8IXQ8 264 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 ZNF714Q96N38 554 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 CBLN4Q9NTU7 201 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 SMG6Q86US8 1419 aaKnown RBP2.65□□□□□ -1.99
PTCD3-214ENST00000483925 SIPA1L1O43166 1804 aa2.65□□□□□ -1.99
PTCD3-214ENST00000483925 ARHGEF11O15085 1522 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 TAF1LQ8IZX4 1826 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 MEIKINA0A087WXM9 373 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 TRBV10-2A0A0K0K1G8 114 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 FAM92AA1XBS5 289 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 H3BMG7 143 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 SDCBPO00560 298 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-214ENST00000483925 RPL22P35268 128 aaKnown RBP2.64□□□□□ -1.99
PTCD3-214ENST00000483925 RRAS2P62070 204 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-214ENST00000483925 FOXF1Q12946 379 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 DEFB128Q7Z7B8 93 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 MMGT1Q8N4V1 131 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 Q8NDZ9 215 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 OR4E2Q8NGC2 313 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 OR5A2Q8NGI9 324 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 ARL11Q969Q4 196 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 MCEEQ96PE7 176 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 LINC00467Q9BRT7 94 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 MRPL16Q9NX20 251 aaKnown RBP2.64□□□□□ -1.99
PTCD3-214ENST00000483925 HHLA3Q9XRX5 114 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 DISP2A7MBM2 1401 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 CEP164Q9UPV0 1460 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 ADAMTS9Q9P2N4 1935 aa2.64□□□□□ -1.99
PTCD3-214ENST00000483925 ROCK2O75116 1388 aaKnown RBP2.63□□□□□ -1.99
PTCD3-214ENST00000483925 DSCAMO60469 2012 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 COL27A1Q8IZC6 1860 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-214ENST00000483925 TRBV27A0A0K0K1C4 114 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 COLCA2A8K830 154 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 FAM25AB3EWG3 89 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 FAM25CB3EWG5 89 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 FAM25GB3EWG6 89 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 LY6LH3BQJ8 138 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 TSPAN19P0C672 248 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 S100PP25815 95 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 EBI3Q14213 229 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 GLYATL3Q5SZD4 288 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 TMEM14EPQ6UXP3 125 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 HMGN2P46Q86SG4 172 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 OR4C6Q8NH72 309 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 BRK1Q8WUW1 75 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 TP53RKQ96S44 253 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 LPAR5Q9H1C0 372 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 MINOS1-NBL1R4GNA1 71 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 DSPPQ9NZW4 1301 aa2.63□□□□□ -1.99
PTCD3-214ENST00000483925 RTL9Q8NET4 1388 aa2.62□□□□□ -1.99
PTCD3-214ENST00000483925 SMARCA2P51531 1590 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms