RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 TRAV30A0A087WSZ9 112 aa20.64■□□□□ 0.89
SHOX2-204ENST00000483851 C11orf94C9JXX5 98 aa20.64■□□□□ 0.89
SHOX2-204ENST00000483851 ATP6V0E1O15342 81 aa20.64■□□□□ 0.89
SHOX2-204ENST00000483851 PLP1P60201 277 aa20.64■□□□□ 0.89
SHOX2-204ENST00000483851 TMEM219Q86XT9 240 aa20.64■□□□□ 0.89
SHOX2-204ENST00000483851 IQCF2Q8IXL9 164 aa20.64■□□□□ 0.89
SHOX2-204ENST00000483851 URGCP-MRPS24S4R325 110 aa20.64■□□□□ 0.89
SHOX2-204ENST00000483851 UNQ5815/PRO19632Q6UWF5 114 aa20.63■□□□□ 0.89
SHOX2-204ENST00000483851 PQLC2Q6ZP29 291 aa20.63■□□□□ 0.89
SHOX2-204ENST00000483851 TMEM37Q8WXS4 190 aa20.63■□□□□ 0.89
SHOX2-204ENST00000483851 COX7A2P2O60397 106 aa20.62■□□□□ 0.89
SHOX2-204ENST00000483851 AMY1AP04745 511 aa20.62■□□□□ 0.89
SHOX2-204ENST00000483851 RPS10P46783 165 aaKnown RBP20.62■□□□□ 0.89
SHOX2-204ENST00000483851 AKR1D1P51857 326 aa20.62■□□□□ 0.89
SHOX2-204ENST00000483851 ZNF674Q2M3X9 581 aa20.62■□□□□ 0.89
SHOX2-204ENST00000483851 TMUB1Q9BVT8 246 aa20.62■□□□□ 0.89
SHOX2-204ENST00000483851 IGHV3-21A0A0B4J1V1 117 aa20.62■□□□□ 0.89
SHOX2-204ENST00000483851 ARL2-SNX15V9GYD0 113 aa20.62■□□□□ 0.89
SHOX2-204ENST00000483851 VPS13CQ709C8 3753 aa20.61■□□□□ 0.89
SHOX2-204ENST00000483851 PDE6DO43924 150 aa20.61■□□□□ 0.89
SHOX2-204ENST00000483851 S100A6P06703 90 aa20.61■□□□□ 0.89
SHOX2-204ENST00000483851 GCHFRP30047 84 aa20.61■□□□□ 0.89
SHOX2-204ENST00000483851 MFAP4P55083 255 aa20.61■□□□□ 0.89
SHOX2-204ENST00000483851 C10orf113Q5VZT2 155 aa20.61■□□□□ 0.89
SHOX2-204ENST00000483851 SPATA31B1PQ5VZV4 182 aa20.61■□□□□ 0.89
SHOX2-204ENST00000483851 MIR17HGQ75NE6 70 aa20.61■□□□□ 0.89
SHOX2-204ENST00000483851 OR5T1Q8NG75 326 aa20.61■□□□□ 0.89
SHOX2-204ENST00000483851 FOXC2Q99958 501 aa20.61■□□□□ 0.89
SHOX2-204ENST00000483851 TRBV24-1A0A075B6N3 115 aa20.6■□□□□ 0.89
SHOX2-204ENST00000483851 C8orf88P0DMB2 117 aa20.6■□□□□ 0.89
SHOX2-204ENST00000483851 FCGR2BP31994 310 aaPredicted RBP20.6■□□□□ 0.89
SHOX2-204ENST00000483851 ADIRFQ15847 76 aa20.6■□□□□ 0.89
SHOX2-204ENST00000483851 TEX29Q8N6K0 151 aa20.6■□□□□ 0.89
SHOX2-204ENST00000483851 TXN2Q99757 166 aa20.6■□□□□ 0.89
SHOX2-204ENST00000483851 TMEM167BQ9NRX6 74 aa20.6■□□□□ 0.89
SHOX2-204ENST00000483851 SOX21Q9Y651 276 aaPredicted RBP20.6■□□□□ 0.89
SHOX2-204ENST00000483851 ATP5G3P48201 142 aa20.6■□□□□ 0.89
SHOX2-204ENST00000483851 VN1R17PQ8TDU5 208 aa20.6■□□□□ 0.89
SHOX2-204ENST00000483851 ABCA1O95477 2261 aa20.59■□□□□ 0.89
SHOX2-204ENST00000483851 ZNF98A6NK75 572 aa20.58■□□□□ 0.89
SHOX2-204ENST00000483851 AP4M1O00189 453 aa20.58■□□□□ 0.89
SHOX2-204ENST00000483851 SCGB2A1O75556 95 aa20.58■□□□□ 0.89
SHOX2-204ENST00000483851 OR5R1Q8NH85 324 aa20.58■□□□□ 0.89
SHOX2-204ENST00000483851 F6UZH7 168 aa20.58■□□□□ 0.88
SHOX2-204ENST00000483851 IGKV1-17P01599 117 aa20.58■□□□□ 0.88
SHOX2-204ENST00000483851 IGF1P05019 195 aa20.58■□□□□ 0.88
SHOX2-204ENST00000483851 ECSCRQ19T08 205 aa20.58■□□□□ 0.88
SHOX2-204ENST00000483851 DEFB112Q30KQ8 113 aa20.58■□□□□ 0.88
SHOX2-204ENST00000483851 PATE2Q6UY27 113 aa20.58■□□□□ 0.88
SHOX2-204ENST00000483851 FAM210BQ96KR6 192 aa20.58■□□□□ 0.88
SHOX2-204ENST00000483851 C21orf62Q9NYP8 219 aa20.58■□□□□ 0.88
SHOX2-204ENST00000483851 TRBV9A0A0B4J1U6 114 aa20.57■□□□□ 0.88
SHOX2-204ENST00000483851 IGHG2P01859 326 aa20.57■□□□□ 0.88
SHOX2-204ENST00000483851 PFN1P07737 140 aaKnown RBP20.57■□□□□ 0.88
SHOX2-204ENST00000483851 UBE2G2P60604 165 aa20.57■□□□□ 0.88
SHOX2-204ENST00000483851 YPEL3P61236 119 aaPredicted RBP20.57■□□□□ 0.88
SHOX2-204ENST00000483851 FABP9Q0Z7S8 132 aa20.57■□□□□ 0.88
SHOX2-204ENST00000483851 LY6EQ16553 131 aa20.57■□□□□ 0.88
SHOX2-204ENST00000483851 C19orf54Q5BKX5 351 aa20.57■□□□□ 0.88
SHOX2-204ENST00000483851 OR51G1Q8NGK1 321 aa20.57■□□□□ 0.88
SHOX2-204ENST00000483851 PYGO2Q9BRQ0 406 aa20.57■□□□□ 0.88
SHOX2-204ENST00000483851 DOK5Q9P104 306 aa20.57■□□□□ 0.88
SHOX2-204ENST00000483851 HYPMO75409 117 aa20.56■□□□□ 0.88
SHOX2-204ENST00000483851 WFDC11Q8NEX6 87 aa20.56■□□□□ 0.88
SHOX2-204ENST00000483851 FBXL7Q9UJT9 491 aa20.56■□□□□ 0.88
SHOX2-204ENST00000483851 CSMD2Q7Z408 3487 aa20.56■□□□□ 0.88
SHOX2-204ENST00000483851 CREBBPQ92793 2442 aa20.56■□□□□ 0.88
SHOX2-204ENST00000483851 GNG7O60262 68 aa20.56■□□□□ 0.88
SHOX2-204ENST00000483851 NDUFB8O95169 186 aa20.56■□□□□ 0.88
SHOX2-204ENST00000483851 PSG1P11464 419 aa20.56■□□□□ 0.88
SHOX2-204ENST00000483851 STXBP6Q8NFX7 210 aa20.56■□□□□ 0.88
SHOX2-204ENST00000483851 TRAV41A0A0B4J266 112 aa20.55■□□□□ 0.88
SHOX2-204ENST00000483851 OR2J3O76001 311 aa20.55■□□□□ 0.88
SHOX2-204ENST00000483851 BRI3O95415 125 aa20.55■□□□□ 0.88
SHOX2-204ENST00000483851 TOMM40O96008 361 aa20.55■□□□□ 0.88
SHOX2-204ENST00000483851 RD3LP0DJH9 198 aa20.55■□□□□ 0.88
SHOX2-204ENST00000483851 TIGITQ495A1 244 aa20.55■□□□□ 0.88
SHOX2-204ENST00000483851 CST9LP1Q5W188 147 aa20.55■□□□□ 0.88
SHOX2-204ENST00000483851 FAM167A-AS1Q96KT0 104 aa20.55■□□□□ 0.88
SHOX2-204ENST00000483851 ZNF580Q9UK33 172 aa20.55■□□□□ 0.88
SHOX2-204ENST00000483851 LINC01548A6NM66 108 aa20.54■□□□□ 0.88
SHOX2-204ENST00000483851 TGOLN2O43493 480 aa20.54■□□□□ 0.88
SHOX2-204ENST00000483851 IER3P46695 156 aa20.54■□□□□ 0.88
SHOX2-204ENST00000483851 KIAA0141Q14154 515 aaPredicted RBP20.54■□□□□ 0.88
SHOX2-204ENST00000483851 BCL6BQ8N143 479 aaPredicted RBP20.54■□□□□ 0.88
SHOX2-204ENST00000483851 NECAP1Q8NC96 275 aa20.54■□□□□ 0.88
SHOX2-204ENST00000483851 PRDM13Q9H4Q3 707 aa20.54■□□□□ 0.88
SHOX2-204ENST00000483851 GAR1Q9NY12 217 aaKnown RBP20.54■□□□□ 0.88
SHOX2-204ENST00000483851 PHOX2AO14813 284 aa20.54■□□□□ 0.88
SHOX2-204ENST00000483851 LINC00305Q7Z4B0 112 aa20.54■□□□□ 0.88
SHOX2-204ENST00000483851 OR1B1Q8NGR6 318 aa20.54■□□□□ 0.88
SHOX2-204ENST00000483851 GSX1Q9H4S2 264 aaPredicted RBP20.54■□□□□ 0.88
SHOX2-204ENST00000483851 ZNF355PQ9NSJ1 428 aa20.54■□□□□ 0.88
SHOX2-204ENST00000483851 YTHDF2Q9Y5A9 579 aaKnown RBP20.54■□□□□ 0.88
SHOX2-204ENST00000483851 MAP1AP78559 2803 aaPredicted RBP20.53■□□□□ 0.88
SHOX2-204ENST00000483851 SH2D7A6NKC9 451 aaPredicted RBP20.53■□□□□ 0.88
SHOX2-204ENST00000483851 OR7C2O60412 319 aa20.53■□□□□ 0.88
SHOX2-204ENST00000483851 ORM2P19652 201 aa20.53■□□□□ 0.88
SHOX2-204ENST00000483851 MEOX2P50222 304 aa20.53■□□□□ 0.88
SHOX2-204ENST00000483851 ANAPC16Q96DE5 110 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms