RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 TRAV4A0A0B4J268 109 aa2.37□□□□□ -2.03
MCF2-207ENST00000483690 HCRTO43612 131 aa2.37□□□□□ -2.03
MCF2-207ENST00000483690 OR1I1O60431 355 aa2.37□□□□□ -2.03
MCF2-207ENST00000483690 NEFHP12036 1026 aa2.37□□□□□ -2.03
MCF2-207ENST00000483690 SRIP30626 198 aa2.37□□□□□ -2.03
MCF2-207ENST00000483690 SSR2P43308 183 aa2.37□□□□□ -2.03
MCF2-207ENST00000483690 EIF5AP63241 154 aaKnown RBP2.37□□□□□ -2.03
MCF2-207ENST00000483690 UTP11Q9Y3A2 253 aaKnown RBP2.37□□□□□ -2.03
MCF2-207ENST00000483690 ARL5AQ9Y689 179 aa2.37□□□□□ -2.03
MCF2-207ENST00000483690 LAMB2P55268 1798 aa2.36□□□□□ -2.03
MCF2-207ENST00000483690 SULT1B1O43704 296 aa2.36□□□□□ -2.03
MCF2-207ENST00000483690 CYBAP13498 195 aa2.36□□□□□ -2.03
MCF2-207ENST00000483690 PIGPP57054 158 aa2.36□□□□□ -2.03
MCF2-207ENST00000483690 BASP1P80723 227 aaKnown RBP2.36□□□□□ -2.03
MCF2-207ENST00000483690 GOLT1AQ6ZVE7 132 aa2.36□□□□□ -2.03
MCF2-207ENST00000483690 CEP19Q96LK0 163 aa2.36□□□□□ -2.03
MCF2-207ENST00000483690 TMEM133Q9H2Q1 129 aa2.36□□□□□ -2.03
MCF2-207ENST00000483690 IGKV1-9A0A0C4DH69 117 aa2.35□□□□□ -2.03
MCF2-207ENST00000483690 PROSCO94903 275 aa2.35□□□□□ -2.03
MCF2-207ENST00000483690 RHOGP84095 191 aa2.35□□□□□ -2.03
MCF2-207ENST00000483690 PDE6HQ13956 83 aa2.35□□□□□ -2.03
MCF2-207ENST00000483690 TAF1AQ15573 450 aaPredicted RBP2.35□□□□□ -2.03
MCF2-207ENST00000483690 BRMS1LQ5PSV4 323 aa2.35□□□□□ -2.03
MCF2-207ENST00000483690 PSTPIP2Q9H939 334 aa2.35□□□□□ -2.03
MCF2-207ENST00000483690 ARMC1Q9NVT9 282 aa2.35□□□□□ -2.03
MCF2-207ENST00000483690 DIDO1Q9BTC0 2240 aaKnown RBP2.35□□□□□ -2.03
MCF2-207ENST00000483690 SYNJ1O43426 1573 aa2.35□□□□□ -2.03
MCF2-207ENST00000483690 MROH2BQ7Z745 1585 aa2.35□□□□□ -2.03
MCF2-207ENST00000483690 CLASP1Q7Z460 1538 aa2.34□□□□□ -2.03
MCF2-207ENST00000483690 TRBV19A0A075B6N1 114 aa2.34□□□□□ -2.03
MCF2-207ENST00000483690 TRAV3A0A0B4J244 114 aa2.34□□□□□ -2.03
MCF2-207ENST00000483690 HMGB3O15347 200 aaKnown RBP2.34□□□□□ -2.03
MCF2-207ENST00000483690 SRP14P37108 136 aaKnown RBP2.34□□□□□ -2.03
MCF2-207ENST00000483690 ARF6P62330 175 aa2.34□□□□□ -2.03
MCF2-207ENST00000483690 OR2T10Q8NGZ9 312 aa2.34□□□□□ -2.03
MCF2-207ENST00000483690 HS3ST2Q9Y278 367 aa2.34□□□□□ -2.03
MCF2-207ENST00000483690 TOP2BQ02880 1626 aa2.34□□□□□ -2.04
MCF2-207ENST00000483690 COL4A5P29400 1685 aa2.34□□□□□ -2.04
MCF2-207ENST00000483690 CHD1O14646 1710 aa2.34□□□□□ -2.04
MCF2-207ENST00000483690 FMN1Q68DA7 1419 aa2.34□□□□□ -2.04
MCF2-207ENST00000483690 PTPRMP28827 1452 aa2.33□□□□□ -2.04
MCF2-207ENST00000483690 ATP5G3P48201 142 aa2.33□□□□□ -2.04
MCF2-207ENST00000483690 RAB4BP61018 213 aa2.33□□□□□ -2.04
MCF2-207ENST00000483690 HSPE1P61604 102 aaKnown RBP2.33□□□□□ -2.04
MCF2-207ENST00000483690 OR10J5Q8NHC4 309 aa2.33□□□□□ -2.04
MCF2-207ENST00000483690 SFT2D1Q8WV19 159 aa2.33□□□□□ -2.04
MCF2-207ENST00000483690 CCDC94Q9BW85 323 aaPredicted RBP2.33□□□□□ -2.04
MCF2-207ENST00000483690 SBF1O95248 1867 aa2.33□□□□□ -2.04
MCF2-207ENST00000483690 EIF4G3O43432 1585 aaKnown RBP2.32□□□□□ -2.04
MCF2-207ENST00000483690 KRR1Q13601 381 aaKnown RBP2.32□□□□□ -2.04
MCF2-207ENST00000483690 ESRGQ1W209 222 aa2.32□□□□□ -2.04
MCF2-207ENST00000483690 HELZ2Q9BYK8 2649 aaKnown RBP2.32□□□□□ -2.04
MCF2-207ENST00000483690 CFTRP13569 1480 aa2.32□□□□□ -2.04
MCF2-207ENST00000483690 WIZO95785 1651 aa2.31□□□□□ -2.04
MCF2-207ENST00000483690 EML6Q6ZMW3 1958 aa2.31□□□□□ -2.04
MCF2-207ENST00000483690 HYPMO75409 117 aa2.31□□□□□ -2.04
MCF2-207ENST00000483690 IFNA7P01567 189 aa2.31□□□□□ -2.04
MCF2-207ENST00000483690 RRN3P1Q2M238 152 aa2.31□□□□□ -2.04
MCF2-207ENST00000483690 PXT1Q8NFP0 134 aa2.31□□□□□ -2.04
MCF2-207ENST00000483690 IMUPQ9GZP8 106 aa2.31□□□□□ -2.04
MCF2-207ENST00000483690 SOGA1O94964 1423 aa2.31□□□□□ -2.04
MCF2-207ENST00000483690 KIF13AQ9H1H9 1805 aa2.31□□□□□ -2.04
MCF2-207ENST00000483690 MYH7BA7E2Y1 1941 aa2.3□□□□□ -2.04
MCF2-207ENST00000483690 DENND4CQ5VZ89 1909 aa2.3□□□□□ -2.04
MCF2-207ENST00000483690 EXPH5Q8NEV8 1989 aa2.3□□□□□ -2.04
MCF2-207ENST00000483690 TRAV12-1A0A0B4J245 112 aa2.3□□□□□ -2.04
MCF2-207ENST00000483690 LYZL6O75951 148 aa2.3□□□□□ -2.04
MCF2-207ENST00000483690 CTAG1AP78358 180 aa2.3□□□□□ -2.04
MCF2-207ENST00000483690 HACD4Q5VWC8 232 aa2.3□□□□□ -2.04
MCF2-207ENST00000483690 SLAMF6Q96DU3 332 aa2.3□□□□□ -2.04
MCF2-207ENST00000483690 PRADC1Q9BSG0 188 aa2.3□□□□□ -2.04
MCF2-207ENST00000483690 BCL2L10Q9HD36 194 aa2.3□□□□□ -2.04
MCF2-207ENST00000483690 PRG4Q92954 1404 aaPredicted RBP2.3□□□□□ -2.04
MCF2-207ENST00000483690 DIP2BQ9P265 1576 aa2.3□□□□□ -2.04
MCF2-207ENST00000483690 TAF1LQ8IZX4 1826 aa2.29□□□□□ -2.04
MCF2-207ENST00000483690 CAMSAP1Q5T5Y3 1602 aa2.29□□□□□ -2.04
MCF2-207ENST00000483690 ABCC8Q09428 1581 aa2.29□□□□□ -2.04
MCF2-207ENST00000483690 PEG3Q9GZU2 1588 aa2.29□□□□□ -2.04
MCF2-207ENST00000483690 MAGI1Q96QZ7 1491 aaPredicted RBP2.29□□□□□ -2.04
MCF2-207ENST00000483690 RNASE4P34096 147 aaKnown RBP2.29□□□□□ -2.04
MCF2-207ENST00000483690 PLCXD2Q0VAA5 305 aa2.29□□□□□ -2.04
MCF2-207ENST00000483690 STAG3L4Q8TBR4 150 aa2.29□□□□□ -2.04
MCF2-207ENST00000483690 TEX47Q8TBZ9 253 aa2.29□□□□□ -2.04
MCF2-207ENST00000483690 C6orf62Q9GZU0 229 aaPredicted RBP2.29□□□□□ -2.04
MCF2-207ENST00000483690 KLK9Q9UKQ9 250 aa2.29□□□□□ -2.04
MCF2-207ENST00000483690 COL6A6A6NMZ7 2263 aa2.29□□□□□ -2.04
MCF2-207ENST00000483690 OBSL1O75147 1896 aa2.28□□□□□ -2.04
MCF2-207ENST00000483690 MAPKBP1O60336 1514 aa2.28□□□□□ -2.04
MCF2-207ENST00000483690 A0A087WX48 190 aa2.28□□□□□ -2.04
MCF2-207ENST00000483690 IGKV2D-26A0A0A0MRZ7 120 aa2.28□□□□□ -2.04
MCF2-207ENST00000483690 GEMIN2O14893 280 aaKnown RBP2.28□□□□□ -2.04
MCF2-207ENST00000483690 DYNLT1P63172 113 aa2.28□□□□□ -2.04
MCF2-207ENST00000483690 DHRS4L2Q6PKH6 230 aa2.28□□□□□ -2.04
MCF2-207ENST00000483690 LINC00301Q8NCQ3 95 aa2.28□□□□□ -2.04
MCF2-207ENST00000483690 SLC30A7Q8NEW0 376 aa2.28□□□□□ -2.04
MCF2-207ENST00000483690 POLEQ07864 2286 aa2.28□□□□□ -2.05
MCF2-207ENST00000483690 TEX14Q8IWB6 1497 aa2.27□□□□□ -2.05
MCF2-207ENST00000483690 TRGV10A0A0A0MS01 117 aa2.27□□□□□ -2.05
MCF2-207ENST00000483690 ZNF93P35789 620 aaPredicted RBP2.27□□□□□ -2.05
MCF2-207ENST00000483690 BCL2L15Q5TBC7 163 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms