RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CPNE2Q96FN4 548 aaPredicted RBP4.88□□□□□ -1.63
CLK1-212ENST00000482590 MRPL48Q96GC5 212 aaKnown RBP4.88□□□□□ -1.63
CLK1-212ENST00000482590 FAM19A4Q96LR4 140 aa4.88□□□□□ -1.63
CLK1-212ENST00000482590 SPACA5Q96QH8 159 aa4.88□□□□□ -1.63
CLK1-212ENST00000482590 HIST1H4GQ99525 98 aa4.88□□□□□ -1.63
CLK1-212ENST00000482590 KIR2DL4Q99706 377 aa4.88□□□□□ -1.63
CLK1-212ENST00000482590 B9D2Q9BPU9 175 aa4.88□□□□□ -1.63
CLK1-212ENST00000482590 VSIRQ9H7M9 311 aa4.88□□□□□ -1.63
CLK1-212ENST00000482590 SHPKQ9UHJ6 478 aa4.88□□□□□ -1.63
CLK1-212ENST00000482590 LSM5Q9Y4Y9 91 aaKnown RBP4.88□□□□□ -1.63
CLK1-212ENST00000482590 IGHV4-4A0A075B6R2 117 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 MEIKINA0A087WXM9 373 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 IGKV1-9A0A0C4DH69 117 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 IGKV1-12A0A0C4DH73 117 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 A0A1B0GUV1 79 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 TEX48A0A1B0GUV7 120 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 C12orf77C9JDV5 145 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 DEGS1O15121 323 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 IGKV1D-33P01593 117 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 IGKV1-33P01594 117 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 IGKV1D-12P01611 117 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 PSMB9P28065 219 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 ERVFC1-1P60608 527 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 PRSS8Q16651 343 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 LTC4SQ16873 150 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 C17orf58Q2M2W7 97 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 C1orf195Q5TG92 126 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 C1orf146Q5VVC0 180 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 SLC35E3Q7Z769 313 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 TRPT1Q86TN4 253 aaKnown RBP4.87□□□□□ -1.63
CLK1-212ENST00000482590 SAXO1Q8IYX7 474 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 C6orf223Q8N319 242 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 GPER1Q99527 375 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 GABARAPL3Q9BY60 117 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 FBXL15Q9H469 300 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 IDI2-AS1Q9NZ38 188 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 OR1A1Q9P1Q5 309 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 ORC6Q9Y5N6 252 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 STAB2Q8WWQ8 2551 aa4.87□□□□□ -1.63
CLK1-212ENST00000482590 TRAV39A0A0B4J263 110 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 TSTD3H0UI37 97 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 J3QLW9 94 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 MED6O75586 246 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 IGHV3-7P01780 117 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 GNB3P16520 340 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 ZNF19P17023 458 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 SRPXP78539 464 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 SMAGPQ0VAQ4 97 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 CDNFQ49AH0 187 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 LAMTOR1Q6IAA8 161 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 Q6P435 159 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 CLVS1Q8IUQ0 354 aaPredicted RBP4.86□□□□□ -1.63
CLK1-212ENST00000482590 ZNF695Q8IW36 515 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 DRAM1Q8N682 238 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 C5orf56Q8N8D9 126 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 OR51A4Q8NGJ6 313 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 OR51T1Q8NGJ9 327 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 OR13A1Q8NGR1 328 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 OR10AC1Q8NH08 325 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 LEAP2Q969E1 77 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 BTF3L4Q96K17 158 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 RDH12Q96NR8 316 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 SIGMAR1Q99720 223 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 YTHDF1Q9BYJ9 559 aaKnown RBP4.86□□□□□ -1.63
CLK1-212ENST00000482590 XCL2Q9UBD3 114 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 LINC00527Q9UJ94 153 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 AP4S1Q9Y587 144 aa4.86□□□□□ -1.63
CLK1-212ENST00000482590 SAA2-SAA4A0A096LPE2 208 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 LY6LH3BQJ8 138 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 ARPC5O15511 151 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 CA11O75493 328 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 IGHG2P01859 326 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 RAB3AP20336 220 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 MYL9P24844 172 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 IL3RAP26951 378 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 RSU1Q15404 277 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 KISS1Q15726 138 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 C9orf66Q5T8R8 295 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 RSBN1Q5VWQ0 802 aaPredicted RBP4.85□□□□□ -1.63
CLK1-212ENST00000482590 SFXN4Q6P4A7 337 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 OR5D14Q8NGL3 314 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 OR10K1Q8NGX5 313 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 BLNKQ8WV28 456 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 TNFAIP8L1Q8WVP5 186 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 S100A13Q99584 98 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 FAAP24Q9BTP7 215 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 BIN3Q9NQY0 253 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 U3KQK5 164 aa4.85□□□□□ -1.63
CLK1-212ENST00000482590 IGHV3-72A0A0B4J1Y9 119 aa4.84□□□□□ -1.63
CLK1-212ENST00000482590 IGHV1-3A0A0C4DH29 117 aa4.84□□□□□ -1.63
CLK1-212ENST00000482590 TMEM212A6NML5 194 aa4.84□□□□□ -1.63
CLK1-212ENST00000482590 OR4C45A6NMZ5 311 aa4.84□□□□□ -1.63
CLK1-212ENST00000482590 FOXI3A8MTJ6 420 aaPredicted RBP4.84□□□□□ -1.63
CLK1-212ENST00000482590 PPP5D1E7EU14 171 aa4.84□□□□□ -1.63
CLK1-212ENST00000482590 OR7C1O76099 320 aaPredicted RBP4.84□□□□□ -1.63
CLK1-212ENST00000482590 IFNA1P01562 189 aa4.84□□□□□ -1.63
CLK1-212ENST00000482590 CD2P06729 351 aa4.84□□□□□ -1.63
CLK1-212ENST00000482590 EIF4EP06730 217 aaKnown RBP4.84□□□□□ -1.63
CLK1-212ENST00000482590 VDAC1P21796 283 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms