RNA–Protein interactions for RNA: ENST00000481991.1

USP54-213, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 403 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-213ENST00000481991 TIMM8BQ9Y5J9 83 aaPredicted RBP5.29□□□□□ -1.56
USP54-213ENST00000481991 TRAV12-2A0A075B6T6 113 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 TRAV1-2A0A0B4J238 106 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 A0A0J9YX75 114 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 GPR31O00270 319 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 SIVA1O15304 175 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 SCGNO76038 276 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 INSP01308 110 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 RNASE2P10153 161 aaKnown RBP5.28□□□□□ -1.56
USP54-213ENST00000481991 ZNF182P17025 639 aaPredicted RBP5.28□□□□□ -1.56
USP54-213ENST00000481991 RND2P52198 227 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 RHOBP62745 196 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 C22orf42Q6IC83 251 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 TBC1D26Q86UD7 250 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 NFE4Q86UQ8 179 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 OR10J6PQ8NGY7 276 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 NPIPB3Q92617 1050 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 ACY3Q96HD9 319 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 SEC22AQ96IW7 307 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 MGLLQ99685 303 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 FKBP14Q9NWM8 211 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 DOK5Q9P104 306 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 MRPS16Q9Y3D3 137 aaKnown RBP5.28□□□□□ -1.56
USP54-213ENST00000481991 MYCBP2O75592 4640 aa5.28□□□□□ -1.56
USP54-213ENST00000481991 VPS13BQ7Z7G8 4022 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 TRAV9-2A0A087WT02 112 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 GAGE12BA1L429 117 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 ZNF701M0R085 212 aaPredicted RBP5.27□□□□□ -1.57
USP54-213ENST00000481991 ADAP1O75689 374 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 GAGE7O76087 117 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 P0C879 139 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 GAGE12FP0CL80 117 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 GAGE12GP0CL81 117 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 GAGE12IP0CL82 117 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 UCP1P25874 307 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 PSMB3P49720 205 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 TAS2R20P59543 309 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 YPEL3P61236 119 aaPredicted RBP5.27□□□□□ -1.57
USP54-213ENST00000481991 B2MP61769 119 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 TSPAN5P62079 268 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 IDNKQ5T6J7 187 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 SFXN4Q6P4A7 337 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 DHRS11Q6UWP2 260 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 Q6ZRN7 208 aaPredicted RBP5.27□□□□□ -1.57
USP54-213ENST00000481991 TMEM144Q7Z5S9 345 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 GPR141Q7Z602 305 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 BAP18Q8IXM2 172 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 OR5H2Q8NGV7 314 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 RNASE11Q8TAA1 199 aaKnown RBP5.27□□□□□ -1.57
USP54-213ENST00000481991 CLUHP3Q96NS8 147 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 UPK3BQ9BT76 320 aa5.27□□□□□ -1.57
USP54-213ENST00000481991 PSCAO43653 123 aa5.26□□□□□ -1.57
USP54-213ENST00000481991 IGLC1P0CG04 106 aa5.26□□□□□ -1.57
USP54-213ENST00000481991 RPL5P46777 297 aaKnown RBP5.26□□□□□ -1.57
USP54-213ENST00000481991 HSPA13P48723 471 aa5.26□□□□□ -1.57
USP54-213ENST00000481991 AKR1C2P52895 323 aa5.26□□□□□ -1.57
USP54-213ENST00000481991 FGL1Q08830 312 aa5.26□□□□□ -1.57
USP54-213ENST00000481991 MLLT11Q13015 90 aaPredicted RBP5.26□□□□□ -1.57
USP54-213ENST00000481991 LPCAT3Q6P1A2 487 aa5.26□□□□□ -1.57
USP54-213ENST00000481991 OR8I2Q8N0Y5 310 aa5.26□□□□□ -1.57
USP54-213ENST00000481991 LINC00528Q8N1L1 170 aa5.26□□□□□ -1.57
USP54-213ENST00000481991 SLC25A39Q9BZJ4 359 aaPredicted RBP5.26□□□□□ -1.57
USP54-213ENST00000481991 HEYLQ9NQ87 328 aaPredicted RBP5.26□□□□□ -1.57
USP54-213ENST00000481991 DIABLOQ9NR28 239 aa5.26□□□□□ -1.57
USP54-213ENST00000481991 RHBDL2Q9NX52 303 aa5.26□□□□□ -1.57
USP54-213ENST00000481991 TPRKBQ9Y3C4 175 aa5.26□□□□□ -1.57
USP54-213ENST00000481991 A0A0B4J293 547 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 NOTOA8MTQ0 251 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 NPIPB6E9PJ23 425 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 ISLRO14498 428 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 RGS10O43665 173 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 DUSP14O95147 198 aaKnown RBP5.25□□□□□ -1.57
USP54-213ENST00000481991 NXPH4O95158 308 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 IGKV1-39P01597 117 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 IGKV1D-39P04432 117 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 PRB4P10163 310 aaPredicted RBP5.25□□□□□ -1.57
USP54-213ENST00000481991 PSG1P11464 419 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 PGAM2P15259 253 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 CNN1P51911 297 aaKnown RBP5.25□□□□□ -1.57
USP54-213ENST00000481991 LYZP61626 148 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 GAMTQ14353 236 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 IGFL4Q6B9Z1 124 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 PRSS54Q6PEW0 395 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 CCDC28AQ8IWP9 274 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 SPARTQ8N0X7 666 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 OR11H7Q8NGC8 314 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 GPR146Q96CH1 333 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 C16orf74Q96GX8 76 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 C20orf173Q96LM9 149 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 RSG1Q9BU20 258 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 FAM30AQ9NZY2 134 aa5.25□□□□□ -1.57
USP54-213ENST00000481991 A0A096LPF7 62 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 TOMM40O96008 361 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 RLN2P04090 185 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 SLC25A4P12235 298 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 HOXA5P20719 270 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 HLA-DMAP28067 261 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 TSPOP30536 169 aa5.24□□□□□ -1.57
USP54-213ENST00000481991 NUP62P37198 522 aaPredicted RBP5.24□□□□□ -1.57
USP54-213ENST00000481991 HTR2BP41595 481 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms