RNA–Protein interactions for RNA: ENST00000481788.1

RBM28-205, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-205	ENST00000481788	TM2D2	Q9BX73	214 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	PTTG2	Q9NZH5	202 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	OR51B2	Q9Y5P1	312 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788		V9GY05	133 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788	PKHD1L1	Q86WI1	4243 aa		4.58	□□□□□ -1.68
RBM28-205	ENST00000481788		A0A1W2PS18	150 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	HELT	A6NFD8	242 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	IFITM5	A6NNB3	132 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788		H3BMQ9	156 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	GNG7	O60262	68 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	PPY	P01298	95 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	PRM2	P04554	102 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	EIF4E	P06730	217 aa	Known RBP	4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	HSMCR30	P0CW71	290 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	PSG1	P11464	419 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	NPPC	P23582	126 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	GADD45A	P24522	165 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	GNRHR	P30968	328 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	FCGR2C	P31995	323 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	TALDO1	P37837	337 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	TMBIM6	P55061	237 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	DAD1	P61803	113 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	HAMP	P81172	84 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	FABP5	Q01469	135 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	SPHAR	Q15513	63 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	USF2	Q15853	346 aa	Predicted RBP	4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	ZNF79	Q15937	498 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	CDNF	Q49AH0	187 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	C16orf54	Q6UWD8	224 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	DMBX1	Q8NFW5	382 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	OR51H1	Q8NH63	302 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	FCAMR	Q8WWV6	532 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	BCL7B	Q9BQE9	202 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	HINT2	Q9BX68	163 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	SLC35B3	Q9H1N7	401 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	TMEM231	Q9H6L2	316 aa		4.57	□□□□□ -1.68
RBM28-205	ENST00000481788	IGHV3OR16-12	A0A075B7B8	117 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	TMEM235	A6NFC5	223 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788		A8MTW9	85 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	GABARAP	O95166	117 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	KRAS	P01116	189 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	F2R	P25116	425 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	CALR	P27797	417 aa	Known RBP	4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	G6PC	P35575	357 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	NKX2-1	P43699	371 aa	Predicted RBP	4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	NPBWR1	P48145	328 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	CCL18	P55774	89 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	FXYD7	P58549	80 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	LINC00315	P59091	139 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	DLK1	P80370	383 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	DHRS2	Q13268	280 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	TTC32	Q5I0X7	151 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	GSG1L	Q6UXU4	331 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	YIPF6	Q96EC8	236 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	TMEM56	Q96MV1	263 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	METTL26	Q96S19	204 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	MGLL	Q99685	303 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	FUNDC2	Q9BWH2	189 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	NAA50	Q9GZZ1	169 aa	Known RBP	4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	PRND	Q9UKY0	176 aa		4.56	□□□□□ -1.68
RBM28-205	ENST00000481788	LOC100506127	A0A0U1RQW1	187 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	LYRM9	A8MSI8	78 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	INS-IGF2	F8WCM5	200 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	SOCS3	O14543	225 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	CLN5	O75503	358 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	PGLYRP1	O75594	196 aa	Predicted RBP	4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	ARL6IP5	O75915	188 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	IGKV1-39	P01597	117 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	HBE1	P02100	147 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	IGKV1D-39	P04432	117 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	KRTAP10-4	P60372	401 aa	Predicted RBP	4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	PRCD	Q00LT1	54 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	MLLT11	Q13015	90 aa	Predicted RBP	4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	CATR1	Q13166	79 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	ARL6IP1	Q15041	203 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	TMEM69	Q5SWH9	247 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	AADACL3	Q5VUY0	350 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	AMTN	Q6UX39	209 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	PINX1	Q96BK5	328 aa	Known RBP	4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	MOB3A	Q96BX8	217 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	SEC22A	Q96IW7	307 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	SLC5A7	Q9GZV3	580 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	SAV1	Q9H4B6	383 aa	Predicted RBP	4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	NRN1	Q9NPD7	142 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	TNXB	P22105	4242 aa		4.55	□□□□□ -1.68
RBM28-205	ENST00000481788	TRAV1-2	A0A0B4J238	106 aa		4.54	□□□□□ -1.68
RBM28-205	ENST00000481788	IGLV5-39	A0A0G2JS06	123 aa		4.54	□□□□□ -1.68
RBM28-205	ENST00000481788	METTL21EP	A6NDL7	271 aa		4.54	□□□□□ -1.68
RBM28-205	ENST00000481788		F5H768	121 aa		4.54	□□□□□ -1.68
RBM28-205	ENST00000481788	PRY	O14603	147 aa		4.54	□□□□□ -1.68
RBM28-205	ENST00000481788	CRX	O43186	299 aa	Predicted RBP	4.54	□□□□□ -1.68
RBM28-205	ENST00000481788	BUB3	O43684	328 aa		4.54	□□□□□ -1.68
RBM28-205	ENST00000481788	IGKV3-20	P01619	116 aa		4.54	□□□□□ -1.68
RBM28-205	ENST00000481788	RLN1	P04808	185 aa		4.54	□□□□□ -1.68
RBM28-205	ENST00000481788		P0C879	139 aa		4.54	□□□□□ -1.68
RBM28-205	ENST00000481788	DNAH10OS	P0CZ25	163 aa		4.54	□□□□□ -1.68
RBM28-205	ENST00000481788	RNASE2	P10153	161 aa	Known RBP	4.54	□□□□□ -1.68
RBM28-205	ENST00000481788	LPAR6	P43657	344 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms