RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 ALOX5APP20292 161 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 CRHBPP24387 322 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 CALRP27797 417 aaKnown RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 GCAP28676 217 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 EIF2B2P49770 351 aaKnown RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 RPL14P50914 215 aaKnown RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 CCR6P51684 374 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 SLC18A1P54219 525 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 MTPNP58546 118 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 B2MP61769 119 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 SNRPD3P62318 126 aaKnown RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 CNBPP62633 177 aaKnown RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 SELENOWP63302 87 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 INSL4Q14641 139 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 GNMTQ14749 295 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 VMA21Q3ZAQ7 101 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 KCTD21Q4G0X4 260 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 RPL39P5Q59GN2 51 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 SYT6Q5T7P8 510 aaPredicted RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 BCL2L15Q5TBC7 163 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 RPL13AP3Q6NVV1 102 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 TMED4Q7Z7H5 227 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 ZNF679Q8IYX0 411 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 SLC35F6Q8N357 371 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 MTURNQ8N3F0 131 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 ZNF709Q8N972 641 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 Q8N976 141 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 OR56B1Q8NGI3 324 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 DCANP1Q8TF63 244 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 GALMQ96C23 342 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 TLCD1Q96CP7 247 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 OPALINQ96PE5 141 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 GINS3Q9BRX5 216 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 AGMATQ9BSE5 352 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 TMEM208Q9BTX3 173 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 VSIRQ9H7M9 311 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 TAF9BQ9HBM6 251 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 PSMC3IPQ9P2W1 217 aaPredicted RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 CLEC2DQ9UHP7 191 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 LAMP5Q9UJQ1 280 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 RPH3ALQ9UNE2 315 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 RCL1Q9Y2P8 373 aaKnown RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 LRRC42Q9Y546 428 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 HLA-DRB4X5D2U9 266 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 KMT2DO14686 5537 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 MUC12Q9UKN1 5478 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 IGLV4-60A0A075B6I1 120 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 IGKV1-9A0A0C4DH69 117 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 PLAC8L1A1L4L8 177 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 HELTA6NFD8 242 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 TRPC5OSA6NMA1 111 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 RIIAD1A6NNX1 92 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 H7C1H1 209 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 DCTN3O75935 186 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 OR7C1O76099 320 aaPredicted RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 YIF1AO95070 293 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 LALBAP00709 142 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 IFNGP01579 166 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 MAS1P04201 325 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 BPGMP07738 259 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 CHTF8P0CG12 524 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 RRASP10301 218 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 ATF1P18846 271 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 IFNGR2P38484 337 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 YAP1P46937 504 aaKnown RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 PSMD7P51665 324 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 AP2S1P53680 142 aaPredicted RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 ACTR3P61158 418 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 CACNG7P62955 275 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 PRR3P79522 188 aaKnown RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 MT1HP80294 61 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 MRPS25P82663 173 aaKnown RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 MRPS15P82914 257 aaKnown RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 TPBGQ13641 420 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 ARFRP1Q13795 201 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 GK3PQ14409 553 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 WFDC2Q14508 124 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 CDK10Q15131 360 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 RTL8BQ17RB0 113 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 MPV17LQ2QL34 196 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 PIGYQ3MUY2 71 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 YIF1BQ5BJH7 314 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 PSMG4Q5JS54 123 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 SAMD4BQ5PRF9 694 aaKnown RBP1.16□□□□□ -2.22
USH2A-204ENST00000481786 FAM162BQ5T6X4 162 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 AADACL4Q5VUY2 407 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 C1orf146Q5VVC0 180 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 LYPD5Q6UWN5 251 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 UTS2BQ765I0 119 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 NEGR1Q7Z3B1 354 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 WFDC10BQ8IUB3 73 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 GAPTQ8N292 157 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 NKAPP1Q8N9T2 125 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 PXT1Q8NFP0 134 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 STXBP6Q8NFX7 210 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 OR51G1Q8NGK1 321 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 OR5D18Q8NGL1 313 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 OR9I1Q8NGQ6 314 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 NEK7Q8TDX7 302 aa1.16□□□□□ -2.22
USH2A-204ENST00000481786 GIPC3Q8TF64 312 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms