RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	MIF	P14174	115 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	GPX2	P18283	190 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	NFYB	P25208	207 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	ATP5G3	P48201	142 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	NDUFA6	P56556	154 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	TAS2R41	P59536	307 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	DEFA3	P59666	94 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	RAB4B	P61018	213 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	GNG3	P63215	75 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	RHOG	P84095	191 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173		Q1T7F1	81 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	ESRG	Q1W209	222 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	FP248	Q71RG6	208 aa	Predicted RBP	0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	S100A7A	Q86SG5	101 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	LYG2	Q86SG7	212 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	C12orf45	Q8N5I9	185 aa	Predicted RBP	0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	SLC30A7	Q8NEW0	376 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	OR5D16	Q8NGK9	328 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	OR2T35	Q8NGX2	323 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	ZNF563	Q8TA94	476 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	SFT2D1	Q8WV19	159 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	SKA2	Q8WVK7	121 aa	Predicted RBP	0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	ZNF625	Q96I27	306 aa	Predicted RBP	0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	LYSMD1	Q96S90	227 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	MRPL57	Q9BQC6	102 aa	Known RBP	0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	HSPB9	Q9BQS6	159 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	SLC25A21	Q9BQT8	299 aa	Predicted RBP	0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	PRADC1	Q9BSG0	188 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	MAP1LC3B	Q9GZQ8	125 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	PCBD2	Q9H0N5	130 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	POPDC3	Q9HBV1	291 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	BCL2L10	Q9HD36	194 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	MED11	Q9P086	117 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	TP73-AS1	Q9UF72	201 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	HS3ST2	Q9Y278	367 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	LAMTOR2	Q9Y2Q5	125 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	UFC1	Q9Y3C8	167 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	LHFPL6	Q9Y693	200 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	YTHDC2	Q9H6S0	1430 aa	Known RBP	0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	NEO1	Q92859	1461 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	ADAMTSL1	Q8N6G6	1762 aa		0.6	□□□□□ -2.31
CCNL1-223	ENST00000481173	OTOF	Q9HC10	1997 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	TOPBP1	Q92547	1522 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	UHRF1BP1	Q6BDS2	1440 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	IGKV3D-7	A0A0C4DH55	119 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	IGKV3OR2-268	A0A0C4DH90	116 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	MAP1LC3B2	A6NCE7	125 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	TLCD2	A6NGC4	264 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	C17orf112	F2Z3M2	114 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	LYRM1	O43325	122 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	OR1I1	O60431	355 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	MRPS14	O60783	128 aa	Known RBP	0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	TIMM17B	O60830	172 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	CST7	O76096	145 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	IFNA21	P01568	189 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	C1QB	P02746	253 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	ANG	P03950	147 aa	Known RBP	0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	FABP1	P07148	127 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	CTSD	P07339	412 aa	Predicted RBP	0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	CRYGA	P11844	174 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	HLA-E	P13747	358 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	FKBP2	P26885	142 aa	Known RBP	0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	G0S2	P27469	103 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	GNG10	P50151	68 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	LSM3	P62310	102 aa	Known RBP	0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	TFAM	Q00059	246 aa	Known RBP	0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	DR1	Q01658	176 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	PLCXD2	Q0VAA5	305 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	HES1	Q14469	280 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	KISS1	Q15726	138 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	SNCB	Q16143	134 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	RTL8B	Q17RB0	113 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	RNASE10	Q5GAN6	216 aa	Known RBP	0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	FAM74A1	Q5RGS3	127 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173		Q6ZQT0	140 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	LINC00311	Q8N616	119 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	LINC00301	Q8NCQ3	95 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	OR4C6	Q8NH72	309 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	AQP3	Q92482	292 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	SLAMF6	Q96DU3	332 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173		Q96M85	177 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	MCEE	Q96PE7	176 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	ADAT1	Q9BUB4	502 aa	Known RBP	0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	RTL8A	Q9BWD3	113 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	NPCDR1	Q9BY65	106 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	MRPL32	Q9BYC8	188 aa	Known RBP	0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	CYSTM1	Q9H1C7	97 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	TMEM133	Q9H2Q1	129 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	TCEAL2	Q9H3H9	227 aa	Predicted RBP	0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	KLK9	Q9UKQ9	250 aa		0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	0.59	□□□□□ -2.31
CCNL1-223	ENST00000481173	KDM6A	O15550	1401 aa	Predicted RBP	0.58	□□□□□ -2.32
CCNL1-223	ENST00000481173	MIA2	Q96PC5	1412 aa		0.58	□□□□□ -2.32
CCNL1-223	ENST00000481173	IGKV3-7	A0A075B6H7	116 aa		0.58	□□□□□ -2.32
CCNL1-223	ENST00000481173		A0A087WX48	190 aa		0.58	□□□□□ -2.32
CCNL1-223	ENST00000481173	IGKV2D-26	A0A0A0MRZ7	120 aa		0.58	□□□□□ -2.32
CCNL1-223	ENST00000481173	TRAV12-1	A0A0B4J245	112 aa		0.58	□□□□□ -2.32
CCNL1-223	ENST00000481173	TRAV1-1	A0A0B4J248	108 aa		0.58	□□□□□ -2.32
CCNL1-223	ENST00000481173	ARL5C	A6NH57	179 aa		0.58	□□□□□ -2.32
CCNL1-223	ENST00000481173	TSTD3	H0UI37	97 aa		0.58	□□□□□ -2.32

Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms