RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 ZNF324O75467 553 aaPredicted RBP5.6□□□□□ -1.51
LSM5-210ENST00000480956 IGKV1-5P01602 117 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 AKR1D1P51857 326 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 COPZ1P61923 177 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 OR11G2Q8NGC1 345 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 OR51A4Q8NGJ6 313 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 PSME4Q14997 1843 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 UQCRHLA0A096LP55 91 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 ARRDC5A6NEK1 342 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 HLA-DQA1P01909 254 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 PRM2P04554 102 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 UQCRHP07919 91 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 TGFBR1P36897 503 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 AADACL3Q5VUY0 350 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 OR4E2Q8NGC2 313 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 OR2T10Q8NGZ9 312 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 NIT2Q9NQR4 276 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 IL36BQ9NZH7 164 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 PHLDA3Q9Y5J5 127 aa5.59□□□□□ -1.51
LSM5-210ENST00000480956 ECM29Q5VYK3 1845 aa5.59□□□□□ -1.52
LSM5-210ENST00000480956 LAMB1P07942 1786 aa5.59□□□□□ -1.52
LSM5-210ENST00000480956 SBF1O95248 1867 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 A0A1W2PP18 115 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 C1orf196B1AJZ1 125 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 CORTO00230 105 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 MT-ND4LP03901 98 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 PAEPP09466 180 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 CSN1S1P47710 185 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 AKR1C2P52895 323 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 AMTNQ6UX39 209 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 AMN1Q8IY45 258 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 PPTC7Q8NI37 304 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 ZNF418Q8TF45 676 aaPredicted RBP5.58□□□□□ -1.52
LSM5-210ENST00000480956 TBL1YQ9BQ87 522 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 TAF9BQ9HBM6 251 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 FUT9Q9Y231 359 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 HCFC1P51610 2035 aa5.58□□□□□ -1.52
LSM5-210ENST00000480956 DICER1Q9UPY3 1922 aaKnown RBP5.58□□□□□ -1.52
LSM5-210ENST00000480956 IGHV3-21A0A0B4J1V1 117 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 PGLYRP1O75594 196 aaPredicted RBP5.57□□□□□ -1.52
LSM5-210ENST00000480956 S100A4P26447 101 aaKnown RBP5.57□□□□□ -1.52
LSM5-210ENST00000480956 RPL35P42766 123 aaKnown RBP5.57□□□□□ -1.52
LSM5-210ENST00000480956 TMEM244Q5VVB8 128 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 FAAP20Q6NZ36 180 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 IFT20Q8IY31 132 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 RPP25LQ8N5L8 163 aaKnown RBP5.57□□□□□ -1.52
LSM5-210ENST00000480956 ZNF799Q96GE5 643 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 MYH1P12882 1939 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 MYH8P13535 1937 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 PLXNB3Q9ULL4 1909 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 ZNF860A6NHJ4 632 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 OR2T1O43869 369 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 SDC2P34741 201 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 NDUFA6P56556 154 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 SP6Q3SY56 376 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 NTM-AS1Q6ZSK4 140 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 DCANP1Q8TF63 244 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 DERL1Q9BUN8 251 aa5.57□□□□□ -1.52
LSM5-210ENST00000480956 KLK5Q9Y337 293 aaPredicted RBP5.57□□□□□ -1.52
LSM5-210ENST00000480956 FOCADQ5VW36 1801 aa5.56□□□□□ -1.52
LSM5-210ENST00000480956 LOC107984640A0A0U1RRK4 108 aa5.56□□□□□ -1.52
LSM5-210ENST00000480956 IRGMA1A4Y4 181 aa5.56□□□□□ -1.52
LSM5-210ENST00000480956 A6NDX4 124 aa5.56□□□□□ -1.52
LSM5-210ENST00000480956 GPX1P07203 203 aa5.56□□□□□ -1.52
LSM5-210ENST00000480956 OR5AC1P0C628 307 aa5.56□□□□□ -1.52
LSM5-210ENST00000480956 BCL2L15Q5TBC7 163 aa5.56□□□□□ -1.52
LSM5-210ENST00000480956 CTAGE3PQ8IX95 158 aa5.56□□□□□ -1.52
LSM5-210ENST00000480956 Q8N9W7 124 aa5.56□□□□□ -1.52
LSM5-210ENST00000480956 TCEAL2Q9H3H9 227 aaPredicted RBP5.56□□□□□ -1.52
LSM5-210ENST00000480956 TICRRQ7Z2Z1 1910 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 LEUTXA8MZ59 168 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 M0R378 163 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 LINC00694P0DN24 101 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 PTHLHP12272 177 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 LGALS3P17931 250 aaKnown RBP5.55□□□□□ -1.52
LSM5-210ENST00000480956 CRYBB3P26998 211 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 FAM104BQ5XKR9 115 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 AMMECR1LQ6DCA0 310 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 TCTEX1D1Q8N7M0 179 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 ZC2HC1AQ96GY0 325 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 FAM60AQ9NP50 221 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 ZNF586Q9NXT0 402 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 MCTS1Q9ULC4 181 aaKnown RBP5.55□□□□□ -1.52
LSM5-210ENST00000480956 DDX60LQ5H9U9 1706 aaKnown RBP5.55□□□□□ -1.52
LSM5-210ENST00000480956 ATG2BQ96BY7 2078 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 DSCAML1Q8TD84 2053 aa5.55□□□□□ -1.52
LSM5-210ENST00000480956 IGHV3-64DA0A0J9YX35 117 aa5.54□□□□□ -1.52
LSM5-210ENST00000480956 TMEM223A0PJW6 202 aa5.54□□□□□ -1.52
LSM5-210ENST00000480956 RBFOX2O43251 390 aaKnown RBP eCLIP5.54□□□□□ -1.52
LSM5-210ENST00000480956 CST7O76096 145 aa5.54□□□□□ -1.52
LSM5-210ENST00000480956 FGF7P21781 194 aa5.54□□□□□ -1.52
LSM5-210ENST00000480956 RAB5CP51148 216 aa5.54□□□□□ -1.52
LSM5-210ENST00000480956 PPP3R1P63098 170 aa5.54□□□□□ -1.52
LSM5-210ENST00000480956 SYCNQ0VAF6 134 aa5.54□□□□□ -1.52
LSM5-210ENST00000480956 MSMO1Q15800 293 aa5.54□□□□□ -1.52
LSM5-210ENST00000480956 LGALS9BQ3B8N2 356 aa5.54□□□□□ -1.52
LSM5-210ENST00000480956 HIGD2BQ4VC39 106 aa5.54□□□□□ -1.52
LSM5-210ENST00000480956 C9orf129Q5T035 196 aaKnown RBP5.54□□□□□ -1.52
LSM5-210ENST00000480956 LGALS9CQ6DKI2 356 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms