RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SAA2-SAA4A0A096LPE2 208 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 SAA2P0DJI9 122 aaPredicted RBP7.99□□□□□ -1.13
VEGFA-212ENST00000480614 C18orf12Q96KH6 178 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 C17orf98A8MV24 154 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 IGHV3OR16-10A0A075B7F0 116 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 IGHV3-66A0A0C4DH42 116 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 COLQQ9Y215 455 aaPredicted RBP7.99□□□□□ -1.13
VEGFA-212ENST00000480614 MTORP42345 2549 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 THBDP07204 575 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 SAA1P0DJI8 122 aaPredicted RBP7.99□□□□□ -1.13
VEGFA-212ENST00000480614 TRAV8-4A0A0B4J246 113 aa7.99□□□□□ -1.13
VEGFA-212ENST00000480614 RSPO4Q2I0M5 234 aaPredicted RBP7.98□□□□□ -1.13
VEGFA-212ENST00000480614 GNB1LQ9BYB4 327 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 WNT2P09544 360 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 CHTOPQ9Y3Y2 248 aaKnown RBP7.98□□□□□ -1.13
VEGFA-212ENST00000480614 C19orf48Q6RUI8 117 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 HAPLN4Q86UW8 402 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 OOSP1A8MZH6 123 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 USP9XQ93008 2570 aaPredicted RBP7.98□□□□□ -1.13
VEGFA-212ENST00000480614 CRYBA2P53672 197 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 ANAPC13Q9BS18 74 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 PRCDQ00LT1 54 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 HSD52Q0P140 79 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 A8MWV9 139 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 IGHV4-39P01824 125 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 MIR17HGQ75NE6 70 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 GPHA2Q96T91 129 aa7.98□□□□□ -1.13
VEGFA-212ENST00000480614 TRBV6-7A0A0A0MS04 114 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 FAM216BQ8N7L0 139 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 C8orf46Q8TAG6 207 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 TSKUQ8WUA8 353 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 TMEM170AQ8WVE7 144 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 ADARB2-AS1A8MUL3 147 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 RHOGP84095 191 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 C20orf204Q6ZNR8 217 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 ZNF525Q8N782 197 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 CST9LQ9H4G1 147 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 IGHV3-23P01764 117 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 PAX8Q06710 450 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 LAMTOR2Q9Y2Q5 125 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 ZIC3O60481 467 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 NAPSAO96009 420 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 ZFAND6Q6FIF0 208 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 SIGLEC15Q6ZMC9 328 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 FOXL2P58012 376 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 TMEM242Q9NWH2 141 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 MPZP25189 248 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 TGIF1Q15583 401 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 SIGMAR1Q99720 223 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 EPDR1Q9UM22 224 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 UMODP07911 640 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 RTBDNQ9BSG5 229 aaPredicted RBP7.97□□□□□ -1.13
VEGFA-212ENST00000480614 CHCHD5Q9BSY4 110 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 CCL1P22362 96 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 IGLV3-32A0A0A0MS00 114 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 FAM89BQ8N5H3 189 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 DPH3P1Q9H4G8 78 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 TRAV12-3A0A0B4J271 114 aa7.97□□□□□ -1.13
VEGFA-212ENST00000480614 A0A1B0GW64 132 aa7.96□□□□□ -1.13
VEGFA-212ENST00000480614 IGKCP01834 107 aa7.96□□□□□ -1.13
VEGFA-212ENST00000480614 TRBV7-1A0A0A6YYK4 115 aa7.96□□□□□ -1.13
VEGFA-212ENST00000480614 METRNQ9UJH8 293 aa7.96□□□□□ -1.13
VEGFA-212ENST00000480614 ZP1P60852 638 aa7.96□□□□□ -1.14
VEGFA-212ENST00000480614 FBLN7Q53RD9 439 aa7.96□□□□□ -1.14
VEGFA-212ENST00000480614 TRGV9Q99603 122 aa7.96□□□□□ -1.14
VEGFA-212ENST00000480614 LINC00158P58513 81 aa7.96□□□□□ -1.14
VEGFA-212ENST00000480614 ERG28Q9UKR5 140 aa7.96□□□□□ -1.14
VEGFA-212ENST00000480614 IGFBP3P17936 291 aaPredicted RBP7.96□□□□□ -1.14
VEGFA-212ENST00000480614 USMG5Q96IX5 58 aa7.96□□□□□ -1.14
VEGFA-212ENST00000480614 RNF5Q99942 180 aa7.96□□□□□ -1.14
VEGFA-212ENST00000480614 A0A1W2PR77 199 aa7.96□□□□□ -1.14
VEGFA-212ENST00000480614 ZNF415Q09FC8 603 aa7.96□□□□□ -1.14
VEGFA-212ENST00000480614 MINOS1Q5TGZ0 78 aa7.96□□□□□ -1.14
VEGFA-212ENST00000480614 NHP2Q9NX24 153 aaKnown RBP7.96□□□□□ -1.14
VEGFA-212ENST00000480614 MINOS1-NBL1R4GNA1 71 aa7.96□□□□□ -1.14
VEGFA-212ENST00000480614 IL18BPO95998 194 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 PSG8Q9UQ74 426 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 A0A087WX48 190 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 GREM1O60565 184 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 SERF1AO75920 110 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 TOMM40O96008 361 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 HOXD3P31249 432 aaPredicted RBP7.95□□□□□ -1.14
VEGFA-212ENST00000480614 DNAJC30Q96LL9 226 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 TANC1Q9C0D5 1861 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 IGHV1-2P23083 117 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 ORAOV1Q8WV07 137 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 ST6GALNAC6Q969X2 333 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 TRAV1-1A0A0B4J248 108 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 IFI27L1Q96BM0 104 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 C1QTNF4Q9BXJ3 329 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 ZNF562Q6V9R5 426 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 NR2C2APQ86WQ0 139 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 ZNF462Q96JM2 2506 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 ATP1A1-AS1Q5TC04 95 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 RFPL3SP0C7P2 107 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 CSRP1P21291 193 aaKnown RBP7.95□□□□□ -1.14
VEGFA-212ENST00000480614 LEPROTO15243 131 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 OR9G9P0C7N8 305 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 ABHD17AQ96GS6 310 aa7.95□□□□□ -1.14
VEGFA-212ENST00000480614 PLPPR1Q8TBJ4 325 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms