RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 IGLC1P0CG04 106 aa7.95□□□□□ -1.14
TTC28-206ENST00000480563 HRH1P35367 487 aa7.95□□□□□ -1.14
TTC28-206ENST00000480563 YPEL3P61236 119 aaPredicted RBP7.95□□□□□ -1.14
TTC28-206ENST00000480563 TSPAN5P62079 268 aa7.95□□□□□ -1.14
TTC28-206ENST00000480563 USF2Q15853 346 aaPredicted RBP7.95□□□□□ -1.14
TTC28-206ENST00000480563 RNASE12Q5GAN4 147 aaKnown RBP7.95□□□□□ -1.14
TTC28-206ENST00000480563 C1orf158Q8N1D5 194 aa7.95□□□□□ -1.14
TTC28-206ENST00000480563 ZNF709Q8N972 641 aa7.95□□□□□ -1.14
TTC28-206ENST00000480563 OR4B1Q8NGF8 309 aa7.95□□□□□ -1.14
TTC28-206ENST00000480563 OR1S2Q8NGQ3 325 aa7.95□□□□□ -1.14
TTC28-206ENST00000480563 GPX8Q8TED1 209 aa7.95□□□□□ -1.14
TTC28-206ENST00000480563 LINC00052Q96N35 136 aa7.95□□□□□ -1.14
TTC28-206ENST00000480563 C7orf50Q9BRJ6 194 aaKnown RBP7.95□□□□□ -1.14
TTC28-206ENST00000480563 SLIRPQ9GZT3 109 aaKnown RBP7.95□□□□□ -1.14
TTC28-206ENST00000480563 SAV1Q9H4B6 383 aaPredicted RBP7.95□□□□□ -1.14
TTC28-206ENST00000480563 ENY2Q9NPA8 101 aa7.95□□□□□ -1.14
TTC28-206ENST00000480563 RPS10-NUDT3A0A1W2PQS6 291 aa7.94□□□□□ -1.14
TTC28-206ENST00000480563 EPM2AB3EWF7 344 aa7.94□□□□□ -1.14
TTC28-206ENST00000480563 GABARAPH6UMI1 98 aa7.94□□□□□ -1.14
TTC28-206ENST00000480563 CTDSP2O14595 271 aa7.94□□□□□ -1.14
TTC28-206ENST00000480563 IL4P05112 153 aa7.94□□□□□ -1.14
TTC28-206ENST00000480563 P0C879 139 aa7.94□□□□□ -1.14
TTC28-206ENST00000480563 TBPP20226 339 aa7.94□□□□□ -1.14
TTC28-206ENST00000480563 SSBP1Q04837 148 aaKnown RBP7.94□□□□□ -1.14
TTC28-206ENST00000480563 RRN3P1Q2M238 152 aa7.94□□□□□ -1.14
TTC28-206ENST00000480563 CLUHP3Q96NS8 147 aa7.94□□□□□ -1.14
TTC28-206ENST00000480563 SLC35B3Q9H1N7 401 aa7.94□□□□□ -1.14
TTC28-206ENST00000480563 MIXL1Q9H2W2 232 aa7.94□□□□□ -1.14
TTC28-206ENST00000480563 FABP12A6NFH5 140 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 CTDSPLO15194 276 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 NUDT3O95989 172 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 INAFM2P0DMQ5 153 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 OR10J1P30954 320 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 RND2P52198 227 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 AKR1C2P52895 323 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 CCL18P55774 89 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 UCP3P55916 312 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 TAS2R19P59542 299 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 PSG9Q00887 426 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 BSXQ3C1V8 233 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 RNASE10Q5GAN6 216 aaKnown RBP7.93□□□□□ -1.14
TTC28-206ENST00000480563 SPANXN2Q5MJ10 180 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 PRSS54Q6PEW0 395 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 FOXI2Q6ZQN5 318 aa7.93□□□□□ -1.14
TTC28-206ENST00000480563 GSTZ1O43708 216 aaPredicted RBP7.92□□□□□ -1.14
TTC28-206ENST00000480563 ATG12O94817 140 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 RD3LP0DJH9 198 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 SLC25A4P12235 298 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 ID1P41134 155 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 MEF2DQ14814 521 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 ZNF79Q15937 498 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 OR52I2Q8NH67 350 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 SMIM4Q8WVI0 70 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 WDR12Q9GZL7 423 aaKnown RBP7.92□□□□□ -1.14
TTC28-206ENST00000480563 MAGT1Q9H0U3 335 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 KLK11Q9UBX7 282 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 MTFP1Q9UDX5 166 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 LINC00588Q9Y4M8 146 aa7.92□□□□□ -1.14
TTC28-206ENST00000480563 F5H768 121 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 TOMM40O96008 361 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 DEFB130BP0DP73 79 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 DEFB130AP0DP74 79 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 PGAM2P15259 253 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 TNFSF8P32971 234 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 FAUP35544 74 aaKnown RBP7.91□□□□□ -1.14
TTC28-206ENST00000480563 HTR2BP41595 481 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 FAM78BQ5VT40 261 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 SPATA31B1PQ5VZV4 182 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 EBLN2Q6P2I7 272 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 ARRDC1Q8N5I2 433 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 TMEM229BQ8NBD8 167 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 COQ8AQ8NI60 647 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 NPIPB3Q92617 1050 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 TP53RKQ96S44 253 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 ABHD1Q96SE0 405 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 TMEM208Q9BTX3 173 aa7.91□□□□□ -1.14
TTC28-206ENST00000480563 A0A0G2JRQ6 117 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 LYRM9A8MSI8 78 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 DISC1C4P0D8 188 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 F6UB75 175 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 M0QYG6 137 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 RAB3DO95716 219 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 PSG1P11464 419 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 PI3P19957 117 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 INPP1P49441 399 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 PSMB3P49720 205 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 AP3S2P59780 193 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 SPCS3P61009 180 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 RND3P61587 244 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 TRIM16LQ309B1 348 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 C2orf83Q53S99 150 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 PYDC2Q56P42 97 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 OR51G1Q8NGK1 321 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 RNASEH2CQ8TDP1 164 aaKnown RBP7.9□□□□□ -1.14
TTC28-206ENST00000480563 RRNAD1Q96FB5 475 aaKnown RBP7.9□□□□□ -1.14
TTC28-206ENST00000480563 HEYLQ9NQ87 328 aaPredicted RBP7.9□□□□□ -1.14
TTC28-206ENST00000480563 BATF3Q9NR55 127 aa7.9□□□□□ -1.14
TTC28-206ENST00000480563 A0A0J9YX75 114 aa7.89□□□□□ -1.15
TTC28-206ENST00000480563 C3orf85A0A1B0GTC6 90 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms