RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 CACNA1AO00555 2505 aa13.56□□□□□ -0.24
SH3D21-203ENST00000480549 A0A1B0GV72 72 aa13.56□□□□□ -0.24
SH3D21-203ENST00000480549 SAA1P0DJI8 122 aaPredicted RBP13.56□□□□□ -0.24
SH3D21-203ENST00000480549 CD1BP29016 333 aa13.56□□□□□ -0.24
SH3D21-203ENST00000480549 SMAGPQ0VAQ4 97 aa13.56□□□□□ -0.24
SH3D21-203ENST00000480549 OR9G1Q8NH87 305 aa13.56□□□□□ -0.24
SH3D21-203ENST00000480549 OSR1Q8TAX0 266 aaPredicted RBP13.56□□□□□ -0.24
SH3D21-203ENST00000480549 PRNDQ9UKY0 176 aa13.56□□□□□ -0.24
SH3D21-203ENST00000480549 LY6HO94772 140 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 APOA2P02652 100 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 GNB1P62873 340 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 TMEM177Q53S58 311 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 C5orf17Q8NAS9 161 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 GTSF1LQ9H1H1 148 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 ZNF257Q9Y2Q1 563 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 TRAV9-2A0A087WT02 112 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 A6NJY4 79 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 ZNF324O75467 553 aaPredicted RBP13.55□□□□□ -0.24
SH3D21-203ENST00000480549 TMEM133Q9H2Q1 129 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 HIVEP3Q5T1R4 2406 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 ABCA4P78363 2273 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 GAGE10A6NGK3 116 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 OR10G8Q8NGN5 311 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 RAB1BQ9H0U4 201 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 NAT8BQ9UHF3 227 aa13.55□□□□□ -0.24
SH3D21-203ENST00000480549 PPIAL4GP0DN37 164 aa13.54□□□□□ -0.24
SH3D21-203ENST00000480549 UQCRFS1P47985 274 aa13.54□□□□□ -0.24
SH3D21-203ENST00000480549 BVES-AS1Q5T3Y7 98 aa13.54□□□□□ -0.24
SH3D21-203ENST00000480549 DEFB125Q8N687 156 aa13.54□□□□□ -0.24
SH3D21-203ENST00000480549 HARBI1Q96MB7 349 aa13.54□□□□□ -0.24
SH3D21-203ENST00000480549 MT-CO2P00403 227 aa13.54□□□□□ -0.24
SH3D21-203ENST00000480549 GATA2P23769 480 aaPredicted RBP13.54□□□□□ -0.24
SH3D21-203ENST00000480549 PRCDQ00LT1 54 aa13.54□□□□□ -0.24
SH3D21-203ENST00000480549 TREML4Q6UXN2 200 aa13.54□□□□□ -0.24
SH3D21-203ENST00000480549 OR10G9Q8NGN4 311 aa13.54□□□□□ -0.24
SH3D21-203ENST00000480549 OR10G7Q8NGN6 311 aa13.54□□□□□ -0.24
SH3D21-203ENST00000480549 CHRDL1Q9BU40 450 aa13.54□□□□□ -0.24
SH3D21-203ENST00000480549 A0A1W2PPR1 153 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 IGLC1P0CG04 106 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 ATP5G3P48201 142 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 PMCHL1Q16048 86 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 STXBP6Q8NFX7 210 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 OR10W1Q8NGF6 305 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 TEX50A0A1B0GTY4 177 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 AZU1P20160 251 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 NPY1RP25929 384 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 DLX1P56177 255 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 PDPNQ86YL7 162 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 C1orf159Q96HA4 380 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 PIEZO1Q92508 2521 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 CTXND1A0A1B0GTU2 59 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 C17orf112F2Z3M2 114 aa13.53□□□□□ -0.24
SH3D21-203ENST00000480549 FNDC4Q9H6D8 234 aaPredicted RBP13.53□□□□□ -0.24
SH3D21-203ENST00000480549 TNCP24821 2201 aa13.52□□□□□ -0.24
SH3D21-203ENST00000480549 CEACAM3P40198 252 aa13.52□□□□□ -0.24
SH3D21-203ENST00000480549 C8orf46Q8TAG6 207 aa13.52□□□□□ -0.24
SH3D21-203ENST00000480549 ITLN2Q8WWU7 325 aaPredicted RBP13.52□□□□□ -0.24
SH3D21-203ENST00000480549 FLYWCH2Q96CP2 140 aaKnown RBP13.52□□□□□ -0.24
SH3D21-203ENST00000480549 SLC35B1P78383 322 aa13.52□□□□□ -0.25
SH3D21-203ENST00000480549 HINT2Q9BX68 163 aa13.52□□□□□ -0.25
SH3D21-203ENST00000480549 ENY2Q9NPA8 101 aa13.52□□□□□ -0.25
SH3D21-203ENST00000480549 DTX2Q86UW9 622 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 OR4C13Q8NGP0 309 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 MGST2Q99735 147 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 PLEKHA3Q9HB20 300 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 TRAV26-1A0A087WT03 109 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 MPDU1O75352 247 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 IGLV1-47P01700 117 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 IGLV2-23P01705 113 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 MALRD1Q5VYJ5 2156 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 GNLYP22749 145 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 SRIP30626 198 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 RAB9AP51151 201 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 TSKUQ8WUA8 353 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 ATP6V0BQ99437 205 aa13.51□□□□□ -0.25
SH3D21-203ENST00000480549 LSM4Q9Y4Z0 139 aaKnown RBP13.51□□□□□ -0.25
SH3D21-203ENST00000480549 PPIAL4CA0A0B4J2A2 164 aa13.5□□□□□ -0.25
SH3D21-203ENST00000480549 PRB3Q04118 309 aaPredicted RBP13.5□□□□□ -0.25
SH3D21-203ENST00000480549 OR8I2Q8N0Y5 310 aa13.5□□□□□ -0.25
SH3D21-203ENST00000480549 OR8B3Q8NGG8 313 aa13.5□□□□□ -0.25
SH3D21-203ENST00000480549 NEU4Q8WWR8 484 aaPredicted RBP13.5□□□□□ -0.25
SH3D21-203ENST00000480549 OR8B2Q96RD0 313 aa13.5□□□□□ -0.25
SH3D21-203ENST00000480549 PEF1Q9UBV8 284 aaKnown RBP13.5□□□□□ -0.25
SH3D21-203ENST00000480549 TRBV20OR9-2A0A075B6H5 130 aa13.5□□□□□ -0.25
SH3D21-203ENST00000480549 RBP4P02753 201 aa13.5□□□□□ -0.25
SH3D21-203ENST00000480549 C19orf35Q6ZS72 473 aa13.5□□□□□ -0.25
SH3D21-203ENST00000480549 ARL2-SNX15V9GYD0 113 aa13.5□□□□□ -0.25
SH3D21-203ENST00000480549 PKD1L2Q7Z442 2459 aa13.5□□□□□ -0.25
SH3D21-203ENST00000480549 MC5RP33032 325 aa13.49□□□□□ -0.25
SH3D21-203ENST00000480549 CRYBA4P53673 196 aa13.49□□□□□ -0.25
SH3D21-203ENST00000480549 LY6G5BQ8NDX9 201 aa13.49□□□□□ -0.25
SH3D21-203ENST00000480549 OCC1Q8TAD7 63 aa13.49□□□□□ -0.25
SH3D21-203ENST00000480549 TMEM167AQ8TBQ9 72 aa13.49□□□□□ -0.25
SH3D21-203ENST00000480549 GGTLC1Q9BX51 225 aa13.49□□□□□ -0.25
SH3D21-203ENST00000480549 IL36BQ9NZH7 164 aa13.49□□□□□ -0.25
SH3D21-203ENST00000480549 TPRP12270 2363 aaKnown RBP13.49□□□□□ -0.25
SH3D21-203ENST00000480549 OPRK1P41145 380 aa13.49□□□□□ -0.25
SH3D21-203ENST00000480549 RITA1Q96K30 269 aa13.49□□□□□ -0.25
SH3D21-203ENST00000480549 NAA38Q9BRA0 125 aaKnown RBP13.49□□□□□ -0.25
SH3D21-203ENST00000480549 NDUFA4L2Q9NRX3 87 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms