RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PEF1Q9UBV8 284 aaKnown RBP13.58□□□□□ -0.24
UPF3A-206ENST00000480362 CD28P10747 220 aa13.57□□□□□ -0.24
UPF3A-206ENST00000480362 M6PRP20645 277 aa13.57□□□□□ -0.24
UPF3A-206ENST00000480362 FHITP49789 147 aa13.57□□□□□ -0.24
UPF3A-206ENST00000480362 GCSAMLQ5JQS6 135 aa13.57□□□□□ -0.24
UPF3A-206ENST00000480362 OR51G1Q8NGK1 321 aa13.57□□□□□ -0.24
UPF3A-206ENST00000480362 OR10G4Q8NGN3 311 aa13.57□□□□□ -0.24
UPF3A-206ENST00000480362 OR10G9Q8NGN4 311 aa13.57□□□□□ -0.24
UPF3A-206ENST00000480362 OR10G7Q8NGN6 311 aa13.57□□□□□ -0.24
UPF3A-206ENST00000480362 PCNPQ8WW12 178 aaKnown RBP13.57□□□□□ -0.24
UPF3A-206ENST00000480362 IGHV3-35A0A0C4DH35 117 aa13.56□□□□□ -0.24
UPF3A-206ENST00000480362 A0A1B0GUS0 222 aa13.56□□□□□ -0.24
UPF3A-206ENST00000480362 ZNF705EA8MWA4 302 aaPredicted RBP13.56□□□□□ -0.24
UPF3A-206ENST00000480362 CDX1P47902 265 aaPredicted RBP13.56□□□□□ -0.24
UPF3A-206ENST00000480362 FAM209BQ5JX69 171 aa13.56□□□□□ -0.24
UPF3A-206ENST00000480362 ZNF600Q6ZNG1 722 aa13.56□□□□□ -0.24
UPF3A-206ENST00000480362 C11orf44Q8N8P7 122 aa13.56□□□□□ -0.24
UPF3A-206ENST00000480362 FAM213BQ8TBF2 198 aa13.56□□□□□ -0.24
UPF3A-206ENST00000480362 LRRC20Q8TCA0 184 aa13.56□□□□□ -0.24
UPF3A-206ENST00000480362 DOK5Q9P104 306 aa13.56□□□□□ -0.24
UPF3A-206ENST00000480362 WI2-2373I1.2A0A1W2PRP0 233 aa13.55□□□□□ -0.24
UPF3A-206ENST00000480362 LGALS1P09382 135 aaKnown RBP13.55□□□□□ -0.24
UPF3A-206ENST00000480362 ORM2P19652 201 aa13.55□□□□□ -0.24
UPF3A-206ENST00000480362 RAB14P61106 215 aa13.55□□□□□ -0.24
UPF3A-206ENST00000480362 LYZP61626 148 aa13.55□□□□□ -0.24
UPF3A-206ENST00000480362 KHDC1LQ5JSQ8 128 aa13.55□□□□□ -0.24
UPF3A-206ENST00000480362 HIST2H2BDQ6DRA6 164 aa13.55□□□□□ -0.24
UPF3A-206ENST00000480362 FAM122CQ6P4D5 195 aa13.55□□□□□ -0.24
UPF3A-206ENST00000480362 DPPA3Q6W0C5 159 aa13.55□□□□□ -0.24
UPF3A-206ENST00000480362 RPP25LQ8N5L8 163 aaKnown RBP13.55□□□□□ -0.24
UPF3A-206ENST00000480362 OR1B1Q8NGR6 318 aa13.55□□□□□ -0.24
UPF3A-206ENST00000480362 ZNF414Q96IQ9 312 aa13.55□□□□□ -0.24
UPF3A-206ENST00000480362 DNAJC4Q9NNZ3 241 aa13.55□□□□□ -0.24
UPF3A-206ENST00000480362 BMPR1BO00238 502 aa13.54□□□□□ -0.24
UPF3A-206ENST00000480362 OR2C1O95371 312 aa13.54□□□□□ -0.24
UPF3A-206ENST00000480362 IL4P05112 153 aa13.54□□□□□ -0.24
UPF3A-206ENST00000480362 OR5G3P0C626 314 aa13.54□□□□□ -0.24
UPF3A-206ENST00000480362 PLP1P60201 277 aa13.54□□□□□ -0.24
UPF3A-206ENST00000480362 RELQ04864 619 aaPredicted RBP13.54□□□□□ -0.24
UPF3A-206ENST00000480362 PXDC1Q5TGL8 231 aa13.54□□□□□ -0.24
UPF3A-206ENST00000480362 PATE2Q6UY27 113 aa13.54□□□□□ -0.24
UPF3A-206ENST00000480362 C18orf65Q6ZTR6 163 aa13.54□□□□□ -0.24
UPF3A-206ENST00000480362 OR1L4Q8NGR5 311 aa13.54□□□□□ -0.24
UPF3A-206ENST00000480362 TMEM37Q8WXS4 190 aa13.54□□□□□ -0.24
UPF3A-206ENST00000480362 PBDC1Q9BVG4 233 aa13.54□□□□□ -0.24
UPF3A-206ENST00000480362 ACTR3CQ9C0K3 210 aaPredicted RBP13.54□□□□□ -0.24
UPF3A-206ENST00000480362 PUS1Q9Y606 427 aaKnown RBP eCLIP13.54□□□□□ -0.24
UPF3A-206ENST00000480362 A0A1W2PPV4 95 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 I3L521 148 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 COX7A2P2O60397 106 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 GGCTO75223 188 aaKnown RBP13.53□□□□□ -0.24
UPF3A-206ENST00000480362 HYPMO75409 117 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 NMBP08949 121 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 BLOC1S1P78537 153 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 FOXL1Q12952 345 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 ZNF726P1Q15940 193 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 TOMM20LQ6UXN7 152 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 GATAD1Q8WUU5 269 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 WFDC12Q8WWY7 111 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 RNF125Q96EQ8 232 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 SAT2Q96F10 170 aaPredicted RBP13.53□□□□□ -0.24
UPF3A-206ENST00000480362 C19orf24Q9BVV8 132 aa13.53□□□□□ -0.24
UPF3A-206ENST00000480362 ELOA3CA0A087WX78 387 aaPredicted RBP13.52□□□□□ -0.25
UPF3A-206ENST00000480362 EIF3GO75821 320 aaKnown RBP eCLIP13.52□□□□□ -0.25
UPF3A-206ENST00000480362 RHOBP62745 196 aa13.52□□□□□ -0.25
UPF3A-206ENST00000480362 CLLU1Q5K131 121 aa13.52□□□□□ -0.25
UPF3A-206ENST00000480362 FAM78BQ5VT40 261 aa13.52□□□□□ -0.25
UPF3A-206ENST00000480362 C10orf113Q5VZT2 155 aa13.52□□□□□ -0.25
UPF3A-206ENST00000480362 PRIMA1Q86XR5 153 aa13.52□□□□□ -0.25
UPF3A-206ENST00000480362 C4orf3Q8WVX3 66 aa13.52□□□□□ -0.25
UPF3A-206ENST00000480362 RCC1LQ96I51 464 aaKnown RBP13.52□□□□□ -0.25
UPF3A-206ENST00000480362 PFDN5Q99471 154 aa13.52□□□□□ -0.25
UPF3A-206ENST00000480362 CITED2Q99967 270 aaPredicted RBP13.52□□□□□ -0.25
UPF3A-206ENST00000480362 SLC25A22Q9H936 323 aa13.52□□□□□ -0.25
UPF3A-206ENST00000480362 SEPSECSQ9HD40 501 aaKnown RBP13.52□□□□□ -0.25
UPF3A-206ENST00000480362 IGHV3OR16-8A0A075B7F1 116 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 NUDT19A8MXV4 375 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 SEC14L6B5MCN3 397 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 HSPB1P04792 205 aaKnown RBP13.51□□□□□ -0.25
UPF3A-206ENST00000480362 H2AFB1P0C5Y9 115 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 CDC34P49427 236 aaPredicted RBP13.51□□□□□ -0.25
UPF3A-206ENST00000480362 KRTAP10-3P60369 221 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 USF2Q15853 346 aaPredicted RBP13.51□□□□□ -0.25
UPF3A-206ENST00000480362 SPATA31B1PQ5VZV4 182 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 SSX7Q7RTT5 188 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 KLHL30-AS1Q8NEE0 82 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 RAB24Q969Q5 203 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 RNF2Q99496 336 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 ZFAND3Q9H8U3 227 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 MRPL27Q9P0M9 148 aaKnown RBP13.51□□□□□ -0.25
UPF3A-206ENST00000480362 FUT9Q9Y231 359 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 HIGD1AQ9Y241 93 aa13.51□□□□□ -0.25
UPF3A-206ENST00000480362 TSSC4Q9Y5U2 329 aaPredicted RBP13.51□□□□□ -0.25
UPF3A-206ENST00000480362 IGHV4OR15-8A0A075B7B6 117 aa13.5□□□□□ -0.25
UPF3A-206ENST00000480362 A0A087WW49 117 aa13.5□□□□□ -0.25
UPF3A-206ENST00000480362 CTXND1A0A1B0GTU2 59 aa13.5□□□□□ -0.25
UPF3A-206ENST00000480362 NDUFA4O00483 81 aa13.5□□□□□ -0.25
UPF3A-206ENST00000480362 HMGB3O15347 200 aaKnown RBP13.5□□□□□ -0.25
UPF3A-206ENST00000480362 LCN15Q6UWW0 184 aa13.5□□□□□ -0.25
UPF3A-206ENST00000480362 MIR17HGQ75NE6 70 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms