RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 FAM223AQ8IWN6 122 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 OR1B1Q8NGR6 318 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 C11orf52Q96A22 123 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 ZNF503Q96F45 646 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 UHRF2Q96PU4 802 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 TCEAL7Q9BRU2 100 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 TUBA4BQ9H853 241 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 MRPL27Q9P0M9 148 aaKnown RBP8.63□□□□□ -1.03
VTI1A-204ENST00000480057 HIGD1AQ9Y241 93 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 A0A087WWC5 75 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 TRBV7-1A0A0A6YYK4 115 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 C7orf77A4D0Y5 90 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 ZNF727A8MUV8 499 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 F8W735 103 aaPredicted RBP8.62□□□□□ -1.03
VTI1A-204ENST00000480057 AP4M1O00189 453 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 ORM2P19652 201 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 Q56UQ5 140 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 CST9LP1Q5W188 147 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 Q6YL49 198 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 MAPK1IP1LQ8NDC0 245 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 OR5AU1Q8NGC0 362 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 ZNF502Q8TBZ5 544 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 Q8WTZ3 238 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 EEF1AKMT3Q96AZ1 226 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 PAXXQ9BUH6 204 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 OR51M1Q9H341 326 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 SMCO4Q9NRQ5 59 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 TMEM14CQ9P0S9 112 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 DOK5Q9P104 306 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 NAT8Q9UHE5 227 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 PRELID1Q9Y255 219 aa8.62□□□□□ -1.03
VTI1A-204ENST00000480057 PUS1Q9Y606 427 aaKnown RBP eCLIP8.62□□□□□ -1.03
VTI1A-204ENST00000480057 UTP20O75691 2785 aaKnown RBP8.61□□□□□ -1.03
VTI1A-204ENST00000480057 M0R036 132 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 CEBPGP53567 150 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 UBE2G2P60604 165 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 UBE2L3P68036 154 aaKnown RBP8.61□□□□□ -1.03
VTI1A-204ENST00000480057 RHOGP84095 191 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 LY6EQ16553 131 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 HIST2H2BCQ6DN03 193 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 ZNF491Q8N8L2 437 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 WFDC11Q8NEX6 87 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 RPUSD4Q96CM3 377 aaKnown RBP8.61□□□□□ -1.03
VTI1A-204ENST00000480057 SMIM7Q9BQ49 75 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 PARLQ9H300 379 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 SDF2L1Q9HCN8 221 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 YTHDF2Q9Y5A9 579 aaKnown RBP8.61□□□□□ -1.03
VTI1A-204ENST00000480057 SOX21Q9Y651 276 aaPredicted RBP8.61□□□□□ -1.03
VTI1A-204ENST00000480057 DOPEY2Q9Y3R5 2298 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 NAV2Q8IVL1 2488 aa8.61□□□□□ -1.03
VTI1A-204ENST00000480057 TACC2O95359 2948 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 TMEM89A2RUT3 159 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 LINC01548A6NM66 108 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 G3V318 75 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 H3BRN7 92 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 NUPL2O15504 423 aaKnown RBP8.6□□□□□ -1.03
VTI1A-204ENST00000480057 PPIFP30405 207 aaKnown RBP8.6□□□□□ -1.03
VTI1A-204ENST00000480057 ATP5G3P48201 142 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 LYZP61626 148 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 TMEM241Q24JQ0 296 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 C15orf32Q32M92 178 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 ZNF600Q6ZNG1 722 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 BCL6BQ8N143 479 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-204ENST00000480057 FXYD5Q96DB9 178 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 RNF125Q96EQ8 232 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 USMG5Q96IX5 58 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 SHANK2-AS3Q9BTD1 123 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 SLC25A39Q9BZJ4 359 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-204ENST00000480057 GSX1Q9H4S2 264 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-204ENST00000480057 RPS10P5Q9NQ39 176 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 VPREB3Q9UKI3 123 aa8.6□□□□□ -1.03
VTI1A-204ENST00000480057 TRAV5A0A0B4J249 113 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 MDFIC2A0A1B0GVS7 189 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 CXorf65A6NEN9 183 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 SH2D7A6NKC9 451 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-204ENST00000480057 IGHV4-59P01825 116 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 CTSGP08311 255 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 GP9P14770 177 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 NPPCP23582 126 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 ATP5G2Q06055 141 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 C9orf152Q5JTZ5 239 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 FAM209BQ5JX69 171 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 MORN5Q5VZ52 161 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 ZNF343Q6P1L6 599 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 TMEM86BQ8N661 226 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 TMEM242Q9NWH2 141 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 LY96Q9Y6Y9 160 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 TENM4Q6N022 2769 aa8.59□□□□□ -1.03
VTI1A-204ENST00000480057 CRYBG3Q68DQ2 2970 aa8.58□□□□□ -1.04
VTI1A-204ENST00000480057 C9JCJ5 164 aa8.58□□□□□ -1.04
VTI1A-204ENST00000480057 IL4P05112 153 aa8.58□□□□□ -1.04
VTI1A-204ENST00000480057 OR10J4P0C629 311 aa8.58□□□□□ -1.04
VTI1A-204ENST00000480057 HIST1H1EP10412 219 aaKnown RBP8.58□□□□□ -1.04
VTI1A-204ENST00000480057 RAB9AP51151 201 aa8.58□□□□□ -1.04
VTI1A-204ENST00000480057 CFHR3Q02985 330 aa8.58□□□□□ -1.04
VTI1A-204ENST00000480057 RELQ04864 619 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-204ENST00000480057 C15orf54Q8N8G6 183 aa8.58□□□□□ -1.04
VTI1A-204ENST00000480057 CTDSP1Q9GZU7 261 aa8.58□□□□□ -1.04
VTI1A-204ENST00000480057 A0A0G2JLM5 398 aa8.57□□□□□ -1.04
VTI1A-204ENST00000480057 GGTLC3B5MD39 225 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms