RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PATE2Q6UY27 113 aa10.75□□□□□ -0.69
PDZRN3-208ENST00000479530 LINC00322Q6ZN03 302 aaPredicted RBP10.75□□□□□ -0.69
PDZRN3-208ENST00000479530 OR4C5Q8NGB2 326 aa10.75□□□□□ -0.69
PDZRN3-208ENST00000479530 GRAMD2BQ96HH9 432 aa10.75□□□□□ -0.69
PDZRN3-208ENST00000479530 GAFA1Q96PS6 74 aa10.75□□□□□ -0.69
PDZRN3-208ENST00000479530 LRBAP50851 2863 aa10.75□□□□□ -0.69
PDZRN3-208ENST00000479530 FCN3O75636 299 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 SAA1P0DJI8 122 aaPredicted RBP10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 FAM169BQ8N8A8 192 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 PPP1R35Q8TAP8 253 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 C7orf69Q9H7B7 122 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 SVEP1Q4LDE5 3571 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 DCHS2Q6V1P9 2916 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 OR4C46A6NHA9 309 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 VAMP3Q15836 100 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 C2orf83Q53S99 150 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 ZNF596Q8TC21 504 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 RNF7Q9UBF6 113 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 SH3BGRL2Q9UJC5 107 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 TANC2Q9HCD6 1990 aa10.74□□□□□ -0.69
PDZRN3-208ENST00000479530 ZZEF1O43149 2961 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 OR2J3O76001 311 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 MZT1Q08AG7 82 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 POU2AF1Q16633 256 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 FAM231DQ6ZW35 169 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 TMEM70Q9BUB7 260 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 PAXXQ9BUH6 204 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 MRPL36Q9P0J6 103 aaKnown RBP10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 ZNF257Q9Y2Q1 563 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 C1orf185Q5T7R7 199 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 RUSC1-AS1Q66K80 236 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 RASL11AQ6T310 242 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 Q6ZS92 163 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 SSX8Q7RTT4 187 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 FNDC4Q9H6D8 234 aaPredicted RBP10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 ZGRF1Q86YA3 2104 aa10.73□□□□□ -0.69
PDZRN3-208ENST00000479530 A0A1B0GXF2 115 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 CD40P25942 277 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 RTL8BQ17RB0 113 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 C19orf24Q9BVV8 132 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 WASHC3Q9Y3C0 194 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 IGHV1-24A0A0C4DH33 117 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 TAX1BP3O14907 124 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 NUDT3O95989 172 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 REG1BP48304 166 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 ZNF138P52744 262 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 C10orf55Q5SWW7 151 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 FAM222BQ8WU58 562 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 FXYD5Q96DB9 178 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 VPS25Q9BRG1 176 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 CSTL1Q9H114 145 aa10.72□□□□□ -0.69
PDZRN3-208ENST00000479530 OR2T8A6NH00 312 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 KLK10O43240 276 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 COX7A2P2O60397 106 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 FSTL3O95633 263 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 CCL3L1P16619 93 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 FOXE3Q13461 319 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 BLNKQ8WV28 456 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 GTSF1Q8WW33 167 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 NPIPB3Q92617 1050 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 MRPL32Q9BYC8 188 aaKnown RBP10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 H3BTX0 84 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 ZNF137PP52743 207 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 DIAPH2-AS1Q14236 149 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 Q71RC1 249 aaPredicted RBP10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 OR1L8Q8NGR8 309 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 ZC2HC1AQ96GY0 325 aa10.71□□□□□ -0.69
PDZRN3-208ENST00000479530 RAI1Q7Z5J4 1906 aaPredicted RBP10.71□□□□□ -0.7
PDZRN3-208ENST00000479530 IGKV1D-37A0A075B6S9 117 aa10.71□□□□□ -0.7
PDZRN3-208ENST00000479530 MUC21A0A0G2JKD1 596 aa10.71□□□□□ -0.7
PDZRN3-208ENST00000479530 MUC21A0A140T8X8 626 aa10.71□□□□□ -0.7
PDZRN3-208ENST00000479530 H0Y8G0 127 aa10.71□□□□□ -0.7
PDZRN3-208ENST00000479530 MUC21Q5SSG8 566 aa10.71□□□□□ -0.7
PDZRN3-208ENST00000479530 C10orf113Q5VZT2 155 aa10.71□□□□□ -0.7
PDZRN3-208ENST00000479530 IGFL3Q6UXB1 125 aa10.71□□□□□ -0.7
PDZRN3-208ENST00000479530 ZNF788Q6ZQV5 615 aa10.71□□□□□ -0.7
PDZRN3-208ENST00000479530 PMCHL2Q9BQD1 86 aa10.71□□□□□ -0.7
PDZRN3-208ENST00000479530 SYS1-DBNDD2H3BUS1 97 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 GATA4P43694 442 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 WT1-ASQ06250 92 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 LRRC10Q5BKY1 277 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 WFDC8Q8IUA0 241 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 CRXO43186 299 aaPredicted RBP10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 HIST1H1EP10412 219 aaKnown RBP10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 PSG1P11464 419 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 PRB3Q04118 309 aaPredicted RBP10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 LDLRAD2Q5SZI1 272 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 BVES-AS1Q5T3Y7 98 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 ADTRPQ96IZ2 230 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 PGLYRP4Q96LB8 373 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 ZNF714Q96N38 554 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 NDUFA4L2Q9NRX3 87 aa10.7□□□□□ -0.7
PDZRN3-208ENST00000479530 MUC6Q6W4X9 2439 aa10.69□□□□□ -0.7
PDZRN3-208ENST00000479530 CGB1A6NKQ9 187 aa10.69□□□□□ -0.7
PDZRN3-208ENST00000479530 MOSP00540 346 aa10.69□□□□□ -0.7
PDZRN3-208ENST00000479530 MYCNOSP40205 109 aa10.69□□□□□ -0.7
PDZRN3-208ENST00000479530 LINC00305Q7Z4B0 112 aa10.69□□□□□ -0.7
PDZRN3-208ENST00000479530 MRPL20Q9BYC9 149 aaKnown RBP10.69□□□□□ -0.7
PDZRN3-208ENST00000479530 TRAV30A0A087WSZ9 112 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms