RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 C11orf1Q9H5F2 150 aa11.58□□□□□ -0.56
C9orf3-217ENST00000479161 PFDN2Q9UHV9 154 aa11.58□□□□□ -0.56
C9orf3-217ENST00000479161 ZFP92A6NM28 416 aa11.57□□□□□ -0.56
C9orf3-217ENST00000479161 OR11H12B2RN74 326 aa11.57□□□□□ -0.56
C9orf3-217ENST00000479161 BOLA2-SMG1P6H3BVE0 249 aa11.57□□□□□ -0.56
C9orf3-217ENST00000479161 CCSO14618 274 aa11.57□□□□□ -0.56
C9orf3-217ENST00000479161 CD7P09564 240 aa11.57□□□□□ -0.56
C9orf3-217ENST00000479161 AP2S1P53680 142 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-217ENST00000479161 PAFAH1B2P68402 229 aa11.57□□□□□ -0.56
C9orf3-217ENST00000479161 DLK1P80370 383 aa11.57□□□□□ -0.56
C9orf3-217ENST00000479161 OR10P1Q8NGE3 313 aa11.57□□□□□ -0.56
C9orf3-217ENST00000479161 GRAMD2BQ96HH9 432 aa11.57□□□□□ -0.56
C9orf3-217ENST00000479161 NMES1Q9C002 83 aa11.57□□□□□ -0.56
C9orf3-217ENST00000479161 SLC45A2Q9UMX9 530 aa11.57□□□□□ -0.56
C9orf3-217ENST00000479161 IGKV1OR2-108A0A075B7D4 117 aa11.56□□□□□ -0.56
C9orf3-217ENST00000479161 H3BP45 60 aa11.56□□□□□ -0.56
C9orf3-217ENST00000479161 K7EPK0 472 aa11.56□□□□□ -0.56
C9orf3-217ENST00000479161 PVALBP20472 110 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-217ENST00000479161 EIF2B2P49770 351 aaKnown RBP11.56□□□□□ -0.56
C9orf3-217ENST00000479161 ST8SIA2Q92186 375 aa11.56□□□□□ -0.56
C9orf3-217ENST00000479161 RNF125Q96EQ8 232 aa11.56□□□□□ -0.56
C9orf3-217ENST00000479161 TUBA4BQ9H853 241 aa11.56□□□□□ -0.56
C9orf3-217ENST00000479161 STAB2Q8WWQ8 2551 aa11.56□□□□□ -0.56
C9orf3-217ENST00000479161 FAM25EA8MYX2 175 aa11.55□□□□□ -0.56
C9orf3-217ENST00000479161 BUB3O43684 328 aa11.55□□□□□ -0.56
C9orf3-217ENST00000479161 DEDDO75618 318 aa11.55□□□□□ -0.56
C9orf3-217ENST00000479161 SCGB1D2O95969 90 aa11.55□□□□□ -0.56
C9orf3-217ENST00000479161 APOHP02749 345 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-217ENST00000479161 IL4P05112 153 aa11.55□□□□□ -0.56
C9orf3-217ENST00000479161 USF2Q15853 346 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-217ENST00000479161 C1orf194Q5T5A4 169 aa11.55□□□□□ -0.56
C9orf3-217ENST00000479161 ACOT7LQ6ZUV0 252 aa11.55□□□□□ -0.56
C9orf3-217ENST00000479161 TCF24Q7RTU0 167 aa11.55□□□□□ -0.56
C9orf3-217ENST00000479161 TM2D3Q9BRN9 247 aa11.55□□□□□ -0.56
C9orf3-217ENST00000479161 NPVFQ9HCQ7 196 aa11.55□□□□□ -0.56
C9orf3-217ENST00000479161 SEPSECSQ9HD40 501 aaKnown RBP11.55□□□□□ -0.56
C9orf3-217ENST00000479161 RABAC1Q9UI14 185 aa11.55□□□□□ -0.56
C9orf3-217ENST00000479161 PAIP2BQ9ULR5 123 aaKnown RBP11.55□□□□□ -0.56
C9orf3-217ENST00000479161 HELTA6NFD8 242 aa11.54□□□□□ -0.56
C9orf3-217ENST00000479161 L7N2F9 121 aa11.54□□□□□ -0.56
C9orf3-217ENST00000479161 DFFBO76075 338 aa11.54□□□□□ -0.56
C9orf3-217ENST00000479161 S100A7P31151 101 aa11.54□□□□□ -0.56
C9orf3-217ENST00000479161 P2RY1P47900 373 aa11.54□□□□□ -0.56
C9orf3-217ENST00000479161 SELENOTP62341 195 aa11.54□□□□□ -0.56
C9orf3-217ENST00000479161 VAMP2P63027 116 aa11.54□□□□□ -0.56
C9orf3-217ENST00000479161 ZNF90Q03938 601 aa11.54□□□□□ -0.56
C9orf3-217ENST00000479161 C16orf54Q6UWD8 224 aa11.54□□□□□ -0.56
C9orf3-217ENST00000479161 SBSPONQ8IVN8 264 aa11.54□□□□□ -0.56
C9orf3-217ENST00000479161 LILRB2Q8N423 598 aa11.54□□□□□ -0.56
C9orf3-217ENST00000479161 METTL15P1P0C7V9 234 aa11.53□□□□□ -0.56
C9orf3-217ENST00000479161 GLMPQ8WWB7 406 aa11.53□□□□□ -0.56
C9orf3-217ENST00000479161 LYRM2Q9NU23 88 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-217ENST00000479161 HUWE1Q7Z6Z7 4374 aaKnown RBP11.53□□□□□ -0.56
C9orf3-217ENST00000479161 IGHV3-49A0A0A0MS15 119 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 RLN2P04090 185 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 PLP1P60201 277 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 AKR1C1Q04828 323 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 RAB32Q13637 225 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 ODF3L2Q3SX64 289 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 BPIFCQ8NFQ6 507 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 MS4A6AQ9H2W1 248 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 ZMAT4Q9H898 229 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 SRD5A3Q9H8P0 318 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 MGAT4CQ9UBM8 478 aa11.52□□□□□ -0.57
C9orf3-217ENST00000479161 LSM5Q9Y4Y9 91 aaKnown RBP11.52□□□□□ -0.57
C9orf3-217ENST00000479161 IGHV3OR16-13A0A075B7E8 117 aa11.51□□□□□ -0.57
C9orf3-217ENST00000479161 IGHV3-74A0A0B4J1X5 117 aa11.51□□□□□ -0.57
C9orf3-217ENST00000479161 HAGHQ16775 308 aa11.51□□□□□ -0.57
C9orf3-217ENST00000479161 PXDC1Q5TGL8 231 aa11.51□□□□□ -0.57
C9orf3-217ENST00000479161 TEPPQ6URK8 271 aa11.51□□□□□ -0.57
C9orf3-217ENST00000479161 AKAP14Q86UN6 197 aa11.51□□□□□ -0.57
C9orf3-217ENST00000479161 FBXL17Q9UF56 701 aa11.51□□□□□ -0.57
C9orf3-217ENST00000479161 U3KQK5 164 aa11.51□□□□□ -0.57
C9orf3-217ENST00000479161 NBEAL2Q6ZNJ1 2754 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 KIR2DL5BA0A0G2JN68 375 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 KIR2DL5BA0A0G2JPC4 375 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 RBMY1BA6NDE4 496 aaKnown RBP11.5□□□□□ -0.57
C9orf3-217ENST00000479161 RBMY1EA6NEQ0 496 aaKnown RBP11.5□□□□□ -0.57
C9orf3-217ENST00000479161 E5RGE8 158 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 K7EQG2 157 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 GOSR2O14653 212 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 RBMY1DP0C7P1 496 aaKnown RBP11.5□□□□□ -0.57
C9orf3-217ENST00000479161 S100A11P31949 105 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 SULT1A1P50225 295 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 H2BFSP57053 126 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 ARL16Q0P5N6 197 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 ATP6V1FQ16864 119 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 VWC2Q2TAL6 325 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 S100A7AQ86SG5 101 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 KIR2DL5AQ8N109 375 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 TMEM252Q8N6L7 170 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 KIR2DL5BQ8NHK3 375 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 DCANP1Q8TF63 244 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 RNF24Q9Y225 148 aa11.5□□□□□ -0.57
C9orf3-217ENST00000479161 TENM3Q9P273 2699 aa11.49□□□□□ -0.57
C9orf3-217ENST00000479161 LOC102724200A0A096LPH7 203 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-217ENST00000479161 DNASE2O00115 360 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-217ENST00000479161 SSNA1O43805 119 aa11.49□□□□□ -0.57
C9orf3-217ENST00000479161 CCNKO75909 580 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms