RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 A0A1W2PPE3 182 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 TMEM72A0PK05 275 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 LRCOL1A6NCL2 159 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 TMEM212A6NML5 194 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 ZNF729A6NN14 1252 aaPredicted RBP2.89□□□□□ -1.95
CCDC171-207ENST00000478913 ZNF726A6NNF4 738 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 MFNGO00587 321 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 OR2T1O43869 369 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 EIF1BO60739 113 aaKnown RBP2.89□□□□□ -1.95
CCDC171-207ENST00000478913 CTNSO60931 367 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 EIF3GO75821 320 aaKnown RBP eCLIP2.89□□□□□ -1.95
CCDC171-207ENST00000478913 TMEM50AO95807 157 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 AIFM1O95831 613 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 IFNA21P01568 189 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 HLA-AP01891 365 aaKnown RBP2.89□□□□□ -1.95
CCDC171-207ENST00000478913 HMGN2P05204 90 aaKnown RBP2.89□□□□□ -1.95
CCDC171-207ENST00000478913 MRPL3P09001 348 aaKnown RBP2.89□□□□□ -1.95
CCDC171-207ENST00000478913 OR4E1P0C645 316 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 SFTA3P0C7M3 94 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 OR8G3PP0DMU2 310 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 ATF1P18846 271 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 CDK2P24941 298 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 PSMB6P28072 239 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 IMPA1P29218 277 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 EIF1P41567 113 aaKnown RBP2.89□□□□□ -1.95
CCDC171-207ENST00000478913 OR12D2P58182 307 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 RPS15AP62244 130 aaKnown RBP2.89□□□□□ -1.95
CCDC171-207ENST00000478913 SKP1P63208 163 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 PRDX1Q06830 199 aaKnown RBP2.89□□□□□ -1.95
CCDC171-207ENST00000478913 ECH1Q13011 328 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 PLPPR5Q32ZL2 321 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 SCGB2B2Q4G0G5 96 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 LINC00483Q53H64 154 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 AKIRIN2Q53H80 203 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 DNLZQ5SXM8 178 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 DRAM2Q6UX65 266 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 DGAT2L6Q6ZPD8 337 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 SSX6Q7RTT6 188 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 RBM45Q8IUH3 476 aaKnown RBP2.89□□□□□ -1.95
CCDC171-207ENST00000478913 COX18Q8N8Q8 333 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 OR5T1Q8NG75 326 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 OR6K6Q8NGW6 343 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 OR8S1Q8NH09 359 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 RXFP4Q8TDU9 374 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 ASB17Q8WXJ9 295 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 CDS1Q92903 461 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 TMEM54Q969K7 222 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 TM4SF18Q96CE8 201 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 OR7D2Q96RA2 312 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 MICU1Q9BPX6 476 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 MS4A8Q9BY19 250 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 SMDT1Q9H4I9 107 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 AUNIPQ9H7T9 357 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 UQCC1Q9NVA1 299 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 TAAR3PQ9P1P4 343 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 MTFP1Q9UDX5 166 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 TNFSF18Q9UNG2 199 aa2.89□□□□□ -1.95
CCDC171-207ENST00000478913 TRAV39A0A0B4J263 110 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 FAM183AA6NL82 134 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 CEACAM18A8MTB9 384 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 J3QRE1 110 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 GPR31O00270 319 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 PLPP1O14494 284 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 PPP1R2P9O14990 202 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 AHSA1O95433 338 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 PRH1P02810 166 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 SLC35G6P0C7Q6 338 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 P0DMU3 169 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 FAM231AP0DMU4 169 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 FAM231CP0DMU5 169 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 SLC2A1P11166 492 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 RAB5AP20339 215 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 PMELP40967 661 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 KCNJ3P48549 501 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 RBP2P50120 134 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 PKIAP61925 76 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 ARF6P62330 175 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 REEP5Q00765 189 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 FABP9Q0Z7S8 132 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 ARHGAP11BQ3KRB8 267 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 AKR1C8PQ5T2L2 129 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 TMEM244Q5VVB8 128 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 CARD17Q5XLA6 110 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 ULK3Q6PHR2 472 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 ZNF493Q6ZR52 646 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 SLC36A1Q7Z2H8 476 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 CBLN2Q8IUK8 224 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 ZNF695Q8IW36 515 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 ZFP82Q8N141 532 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 ZNF615Q8N8J6 731 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 CDRT4Q8N9R6 151 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 SLC30A7Q8NEW0 376 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 OR4C16Q8NGL9 310 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 OR10G4Q8NGN3 311 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 OR1S2Q8NGQ3 325 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 CMSS1Q9BQ75 279 aaKnown RBP2.88□□□□□ -1.95
CCDC171-207ENST00000478913 NDFIP1Q9BT67 221 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 NMES1Q9C002 83 aa2.88□□□□□ -1.95
CCDC171-207ENST00000478913 EIF5A2Q9GZV4 153 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms