RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 AKR1C1Q04828 323 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 RBPMS2Q6ZRY4 209 aaKnown RBP5.2□□□□□ -1.58
BRCA1-215ENST00000478531 ACOT7LQ6ZUV0 252 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 GTSCR1Q86UQ5 136 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 MARC2Q969Z3 335 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 RAB40CQ96S21 281 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 ZFAND3Q9H8U3 227 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 IGKV3-7A0A075B6H7 116 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 IGHV7-4-1A0A0J9YVY3 117 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 PRSS46E5RG02 174 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 IL4P05112 153 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 CAV2P51636 162 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 PAX9P55771 341 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 CD81P60033 236 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 RAB32Q13637 225 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 LRRC37A5PQ49AS3 106 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 OR2K2Q8NGT1 345 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 SMIM8Q96KF7 97 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 PBDC1Q9BVG4 233 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 RHPN1-AS1Q9BWJ2 59 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 ALG5Q9Y673 324 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 K7EMT4 169 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 CHEK1O14757 476 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 APOHP02749 345 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-215ENST00000478531 RD3LP0DJH9 198 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 C8orf88P0DMB2 117 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 PVALBP20472 110 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-215ENST00000478531 H2BFSP57053 126 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 YPEL3P61236 119 aaPredicted RBP5.19□□□□□ -1.58
BRCA1-215ENST00000478531 ZNF90Q03938 601 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 OR2F1Q13607 317 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 RGS21Q2M5E4 152 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 Q8WTZ3 238 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 ST8SIA2Q92186 375 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 METTL26Q96S19 204 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 RNF2Q99496 336 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 WFDC10AQ9H1F0 79 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 MGAT4CQ9UBM8 478 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 SMPXQ9UHP9 88 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 LSM4Q9Y4Z0 139 aaKnown RBP5.19□□□□□ -1.58
BRCA1-215ENST00000478531 SMAD5-AS1Q9Y6J3 95 aa5.19□□□□□ -1.58
BRCA1-215ENST00000478531 IGKV1D-37A0A075B6S9 117 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 IGKV1OR2-108A0A075B7D4 117 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 ZNF785A8K8V0 405 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 TOMM40O96008 361 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 CD7P09564 240 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 PSG1P11464 419 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 NPPCP23582 126 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 TFPI2P48307 235 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 TAS2R30P59541 319 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 LYZP61626 148 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 RPL11P62913 178 aaKnown RBP5.18□□□□□ -1.58
BRCA1-215ENST00000478531 LAMTOR1Q6IAA8 161 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 TMEM14EPQ6UXP3 125 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 OR10P1Q8NGE3 313 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 NARS2Q96I59 477 aaKnown RBP5.18□□□□□ -1.58
BRCA1-215ENST00000478531 NEURL2Q9BR09 285 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 FAM24AA6NFZ4 105 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 CST7O76096 145 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 FABP1P07148 127 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 IGHV4-30-4P0DP06 118 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 BMI1P35226 326 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 B2MP61769 119 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 USF2Q15853 346 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-215ENST00000478531 ZNF674Q2M3X9 581 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 TCF24Q7RTU0 167 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 GBGT1Q8N5D6 347 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 TMEM217Q8N7C4 229 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 OR51G1Q8NGK1 321 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 RNF125Q96EQ8 232 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 NMES1Q9C002 83 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 LYRM2Q9NU23 88 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-215ENST00000478531 DNAH7Q8WXX0 4024 aa5.18□□□□□ -1.58
BRCA1-215ENST00000478531 HUWE1Q7Z6Z7 4374 aaKnown RBP5.18□□□□□ -1.58
BRCA1-215ENST00000478531 PMS2P5A8MQ11 134 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 TSPAN4O14817 238 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 DEDDO75618 318 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 DFFBO76075 338 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 FRMD6-AS1P0C7T7 363 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 GATA2P23769 480 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-215ENST00000478531 CRYBB3P26998 211 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 P2RY1P47900 373 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 DLK1P80370 383 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 SLC38A11Q08AI6 406 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 ARL16Q0P5N6 197 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 IL15RAQ13261 267 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 STX12Q86Y82 276 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 Q8N1Y9 231 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 DEFB125Q8N687 156 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 THAP8Q8NA92 274 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 TRGV9Q99603 122 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 ASCL2Q99929 193 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 SPAG8Q99932 426 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-215ENST00000478531 TMEM231Q9H6L2 316 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 VSIRQ9H7M9 311 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 TUBA4BQ9H853 241 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 OR5AC2Q9NZP5 309 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 UBQLN2Q9UHD9 624 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 RABAC1Q9UI14 185 aa5.17□□□□□ -1.58
BRCA1-215ENST00000478531 TRAV25A0A0B4J276 109 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms