RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 CENPWQ5EE01 88 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 IBA57Q5T440 356 aaKnown RBP3.44□□□□□ -1.86
GPNMB-210ENST00000478451 MIC13Q5XKP0 118 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 OR4A47Q6IF82 309 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 ETFRF1Q6IPR1 90 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 FAM71F2Q6NXP2 309 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 ZNF705AQ6ZN79 300 aaPredicted RBP3.44□□□□□ -1.86
GPNMB-210ENST00000478451 TEX43Q6ZNM6 134 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 ZNF826PQ6ZT77 177 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 TGIF2LXQ8IUE1 241 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 CD177Q8N6Q3 437 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 Q8N7P7 452 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 STXBP6Q8NFX7 210 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 OR2Z1Q8NG97 314 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 OR4P4Q8NGL7 312 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 OR4A5Q8NH83 315 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 RFESDQ8TAC1 157 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 OCC1Q8TAD7 63 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 VSTM2AQ8TAG5 236 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 CACNG8Q8WXS5 425 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 C22orf15Q8WYQ4 148 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 KCNS1Q96KK3 526 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 ZNF714Q96N38 554 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 OR2V2Q96R30 315 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 NABP2Q9BQ15 211 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 ARRDC1-AS1Q9H2J1 176 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 IFI27L2Q9H2X8 130 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 SLC35D1Q9NTN3 355 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 BET1LQ9NYM9 111 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 IDI2-AS1Q9NZ38 188 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 MRPL27Q9P0M9 148 aaKnown RBP3.44□□□□□ -1.86
GPNMB-210ENST00000478451 NAT8BQ9UHF3 227 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 RALYQ9UKM9 306 aaKnown RBP3.44□□□□□ -1.86
GPNMB-210ENST00000478451 OR51B2Q9Y5P1 312 aa3.44□□□□□ -1.86
GPNMB-210ENST00000478451 DSCAMO60469 2012 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 IGKV1D-17A0A075B6S4 117 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 IGHV1-18A0A0C4DH31 117 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 hADV38S2A0JD32 116 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 IZUMO1RA6ND01 250 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 INS-IGF2F8WCM5 200 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 UPK2O00526 184 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 ZNF253O75346 499 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 SERF1AO75920 110 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 GAS8-AS1O95177 125 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 CA2P00918 260 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 LINC00614P0C842 121 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 RNF224P0DH78 156 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 SAA2P0DJI9 122 aaPredicted RBP3.43□□□□□ -1.86
GPNMB-210ENST00000478451 C8orf88P0DMB2 117 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 HIST1H1EP10412 219 aaKnown RBP3.43□□□□□ -1.86
GPNMB-210ENST00000478451 USF1P22415 310 aaPredicted RBP3.43□□□□□ -1.86
GPNMB-210ENST00000478451 PPOXP50336 477 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 UBE2G1P62253 170 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 UBE2L3P68036 154 aaKnown RBP3.43□□□□□ -1.86
GPNMB-210ENST00000478451 MEF2CQ06413 473 aaPredicted RBP3.43□□□□□ -1.86
GPNMB-210ENST00000478451 RPL39P5Q59GN2 51 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 TIMM23BQ5SRD1 257 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 COL5A1-AS1Q5SY13 56 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 HES3Q5TGS1 186 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 IGFL2Q6UWQ7 119 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 Q6ZR03 302 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 FAM231DQ6ZW35 169 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 ATP5L2Q7Z4Y8 100 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 VASH2Q86V25 355 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 LRP11Q86VZ4 500 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 OR8I2Q8N0Y5 310 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 LYG1Q8N1E2 194 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 ABHD12Q8N2K0 398 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 TMEM256Q8N2U0 113 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 TPRX1Q8N7U7 411 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 TMEM105Q8N8V8 129 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 FAM222BQ8WU58 562 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 SSMEM1Q8WWF3 244 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 ST6GALNAC6Q969X2 333 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 RBM14Q96PK6 669 aaKnown RBP3.43□□□□□ -1.86
GPNMB-210ENST00000478451 CDX2Q99626 313 aaPredicted RBP3.43□□□□□ -1.86
GPNMB-210ENST00000478451 HSPB9Q9BQS6 159 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 DERL1Q9BUN8 251 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 HINT2Q9BX68 163 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 PRO3102Q9H379 93 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 CBLN4Q9NTU7 201 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 UQCR10Q9UDW1 63 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 YTHDF2Q9Y5A9 579 aaKnown RBP3.43□□□□□ -1.86
GPNMB-210ENST00000478451 SOX21Q9Y651 276 aaPredicted RBP3.43□□□□□ -1.86
GPNMB-210ENST00000478451 V9GYV3 84 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 PRR14LQ5THK1 2151 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 INTS1Q8N201 2190 aaKnown RBP3.43□□□□□ -1.86
GPNMB-210ENST00000478451 CUL9Q8IWT3 2517 aa3.43□□□□□ -1.86
GPNMB-210ENST00000478451 TNRC18O15417 2968 aaPredicted RBP3.43□□□□□ -1.86
GPNMB-210ENST00000478451 TRBV20OR9-2A0A075B6H5 130 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 IGLV3-9A0A075B6K5 115 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 IGHV3-64DA0A0J9YX35 117 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 SMIM27A0A1W2PRY6 76 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 GRIFINA4D1Z8 144 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 K7EN84 100 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 CORTO00230 105 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 COX7A2P2O60397 106 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 CGAP01215 116 aa3.42□□□□□ -1.86
GPNMB-210ENST00000478451 LHBP01229 141 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms