RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 OR2F1Q13607 317 aa7.72□□□□□ -1.17
HDAC6-222ENST00000478095 USF2Q15853 346 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-222ENST00000478095 LRRC37A5PQ49AS3 106 aa7.72□□□□□ -1.17
HDAC6-222ENST00000478095 TMEM14EPQ6UXP3 125 aa7.72□□□□□ -1.17
HDAC6-222ENST00000478095 RBPMS2Q6ZRY4 209 aaKnown RBP7.72□□□□□ -1.17
HDAC6-222ENST00000478095 GTSCR1Q86UQ5 136 aa7.72□□□□□ -1.17
HDAC6-222ENST00000478095 Q8WTZ3 238 aa7.72□□□□□ -1.17
HDAC6-222ENST00000478095 ST8SIA2Q92186 375 aa7.72□□□□□ -1.17
HDAC6-222ENST00000478095 ALG5Q9Y673 324 aa7.72□□□□□ -1.17
HDAC6-222ENST00000478095 SMAD5-AS1Q9Y6J3 95 aa7.72□□□□□ -1.17
HDAC6-222ENST00000478095 IGKV1OR2-108A0A075B7D4 117 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 FAM24AA6NFZ4 105 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 PMS2P5A8MQ11 134 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 EREGO14944 169 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 H2AFB1P0C5Y9 115 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 PSG1P11464 419 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 H2BFSP57053 126 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 ARL16Q0P5N6 197 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 Q8N1Y9 231 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 LILRB2Q8N423 598 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 OR10P1Q8NGE3 313 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 OR51G1Q8NGK1 321 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 METTL26Q96S19 204 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 NEURL2Q9BR09 285 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 PBDC1Q9BVG4 233 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 WFDC10AQ9H1F0 79 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 MGAT4CQ9UBM8 478 aa7.71□□□□□ -1.18
HDAC6-222ENST00000478095 TRAV25A0A0B4J276 109 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 CST7O76096 145 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 IGHV4-30-4P0DP06 118 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 PVALBP20472 110 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-222ENST00000478095 NPPCP23582 126 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 TFPI2P48307 235 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 LYZP61626 148 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 RGS21Q2M5E4 152 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 LAMTOR1Q6IAA8 161 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 GBGT1Q8N5D6 347 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 TMEM217Q8N7C4 229 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 THAP8Q8NA92 274 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 TRGV9Q99603 122 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 ASCL2Q99929 193 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 C11orf1Q9H5F2 150 aa7.7□□□□□ -1.18
HDAC6-222ENST00000478095 IGSF23A1L1A6 192 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 TSPAN4O14817 238 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 DEDDO75618 318 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 DFFBO76075 338 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 HNRNPCP07910 306 aaKnown RBP eCLIP7.69□□□□□ -1.18
HDAC6-222ENST00000478095 FRMD6-AS1P0C7T7 363 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 GATA2P23769 480 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-222ENST00000478095 CRYBB3P26998 211 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 BMI1P35226 326 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 RPL11P62913 178 aaKnown RBP7.69□□□□□ -1.18
HDAC6-222ENST00000478095 DLK1P80370 383 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 TCF24Q7RTU0 167 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 DEFB125Q8N687 156 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 RNF125Q96EQ8 232 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 NARS2Q96I59 477 aaKnown RBP7.69□□□□□ -1.18
HDAC6-222ENST00000478095 SPAG8Q99932 426 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-222ENST00000478095 B9D2Q9BPU9 175 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 NMES1Q9C002 83 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 VSIRQ9H7M9 311 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 LYRM2Q9NU23 88 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-222ENST00000478095 OR5AC2Q9NZP5 309 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 UBQLN2Q9UHD9 624 aa7.69□□□□□ -1.18
HDAC6-222ENST00000478095 H0YIZ8 118 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 FABP1P07148 127 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 CXCL3P19876 107 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 P2RY1P47900 373 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 SLC38A11Q08AI6 406 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 FAM90A2PQ658T7 463 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 TMEM182Q6ZP80 229 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-222ENST00000478095 TMEM144Q7Z5S9 345 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 WFDC3Q8IUB2 231 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 TMEM252Q8N6L7 170 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 PPP1R1CQ8WVI7 109 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 TMEM231Q9H6L2 316 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 TUBA4BQ9H853 241 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 RABAC1Q9UI14 185 aa7.68□□□□□ -1.18
HDAC6-222ENST00000478095 LOC100996750A0A140TA64 210 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 A0A1W2PS18 150 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 OR4C46A6NHA9 309 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 OR11H12B2RN74 326 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 RLN2P04090 185 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 EIF2B2P49770 351 aaKnown RBP7.67□□□□□ -1.18
HDAC6-222ENST00000478095 SULT1A1P50225 295 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 CYCSP99999 105 aaKnown RBP7.67□□□□□ -1.18
HDAC6-222ENST00000478095 OXA1LQ15070 435 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 FCN2Q15485 313 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 CYP2G1PQ6ZSU1 146 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 STX12Q86Y82 276 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 GRAMD2BQ96HH9 432 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 SSBP4Q9BWG4 385 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-222ENST00000478095 KRTAP4-6Q9BYQ5 205 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 MED28Q9H204 178 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 SRD5A3Q9H8P0 318 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 C19orf73Q9NVV2 129 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 U3KQE9 123 aa7.67□□□□□ -1.18
HDAC6-222ENST00000478095 E5RGE8 158 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 MPC2O95563 127 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 ORM2P19652 201 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms