RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 WDR61Q9GZS3 305 aaKnown RBP-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 UBAP1Q9NZ09 502 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 POFUT2Q9Y2G5 429 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 OBSL1O75147 1896 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 HECW2Q9P2P5 1572 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 RTL1A6NKG5 1358 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 PLXND1Q9Y4D7 1925 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 TNS1Q9HBL0 1735 aaKnown RBP-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 GVINP1Q7Z2Y8 2422 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 PKHD1L1Q86WI1 4243 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 SPTBN1Q01082 2364 aaKnown RBP-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 TRBV20OR9-2A0A075B6H5 130 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 TRAV10A0A0B4J240 114 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 RAB19A4D1S5 217 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 H0YIV9 168 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 NEMFO60524 1076 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 ROMO1P60602 79 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 XIAPP98170 497 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 COX6A2Q02221 97 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 FABP9Q0Z7S8 132 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 FAM45BPQ6NSW5 357 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 LRRC25Q8N386 305 aaPredicted RBP-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 DEFB125Q8N687 156 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 WFDC5Q8TCV5 224 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 LIMD2Q9BT23 127 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 IMUPQ9GZP8 106 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 C6orf62Q9GZU0 229 aaPredicted RBP-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 MS4A6AQ9H2W1 248 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 PCTPQ9UKL6 214 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 ERGIC3Q9Y282 383 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 NHSL1Q5SYE7 1610 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 SOGA1O94964 1423 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 LAMB1P07942 1786 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 ABCA1O95477 2261 aa-1.09□□□□□ -2.58
NCKAP1-204ENST00000477988 ESPL1Q14674 2120 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 GOLGA6L7A0A1B0GV03 622 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 B4DSR2 109 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 CCRL2O00421 344 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 STX10O60499 249 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 OR2J2O76002 312 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 FADS2O95864 444 aaKnown RBP-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 HLA-DRAP01903 254 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 CXCL8P10145 99 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 PVALBP20472 110 aaPredicted RBP-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 PTNP21246 168 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 STX3Q13277 289 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 C4orf22Q6V702 233 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 OR5AS1Q8N127 324 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 TMEM161BQ8NDZ6 487 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 OR52L1Q8NGH7 329 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 NAT14Q8WUY8 206 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 DNAJC9Q8WXX5 260 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 RBP7Q96R05 134 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 GPER1Q99527 375 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 CCDC94Q9BW85 323 aaPredicted RBP-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 DERL2Q9GZP9 239 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 BCL2L10Q9HD36 194 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 OR52A1Q9UKL2 312 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 BZW2Q9Y6E2 419 aaKnown RBP-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 PPRC1Q5VV67 1664 aaKnown RBP-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 DOCK4Q8N1I0 1966 aa-1.1□□□□□ -2.59
NCKAP1-204ENST00000477988 CNOT1A5YKK6 2376 aaKnown RBP-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 CSPG4Q6UVK1 2322 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 A0A087WSZ3 146 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 C7orf71A4D174 169 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 PRORSD1PA6NEY8 169 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 A6NN06 94 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 E7EUB6 86 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 ERC2-IT1O76042 136 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 GADD45GO95257 159 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 CD79AP11912 226 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 CASQ1P31415 396 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 DSCR4P56555 118 aaPredicted RBP-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 CLDN12P56749 244 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 TSNQ15631 228 aaKnown RBP-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 LPCAT3Q6P1A2 487 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 C10orf111Q8N326 155 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 OR52R1Q8NGF1 315 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 CANT1Q8WVQ1 401 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 H1FXQ92522 213 aaKnown RBP-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 CNBD2Q96M20 576 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 C2CD3Q4AC94 2353 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 CHD8Q9HCK8 2581 aa-1.11□□□□□ -2.59
NCKAP1-204ENST00000477988 MUC17Q685J3 4493 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 F5P12259 2224 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 A0A096LNT2 108 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 MKRN2OSH3BPM6 223 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 HAND1O96004 215 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 OTCP00480 354 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 TYMSP04818 313 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 OR4E1P0C645 316 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 PDE6GP18545 87 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 PPIBP23284 216 aaKnown RBP-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 KCNJ3P48549 501 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 SYCP1Q15431 976 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 ZNHIT3Q15649 155 aaPredicted RBP-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 GRK1Q15835 563 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 COQ5Q5HYK3 327 aa-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 ST13P4Q8IZP2 240 aaPredicted RBP-1.12□□□□□ -2.59
NCKAP1-204ENST00000477988 OR5D14Q8NGL3 314 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms